Lineage for d6fmka_ (6fmk A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501137Protein Elongin B [54246] (2 species)
  7. 2501138Species Human (Homo sapiens) [TaxId:9606] [54247] (50 PDB entries)
  8. 3050802Domain d6fmka_: 6fmk A: [350864]
    Other proteins in same PDB: d6fmkb1, d6fmkb2, d6fmkc_, d6fmke1, d6fmke2, d6fmkf_, d6fmkh1, d6fmkh2, d6fmki_, d6fmkk1, d6fmkk2, d6fmkl_
    automated match to d1lqba_
    complexed with dv8

Details for d6fmka_

PDB Entry: 6fmk (more details), 2.75 Å

PDB Description: pvhl:elob:eloc in complex with n-((s)-1-((2s,4r)-4-hydroxy-2-((4-(4- methylthiazol-5-yl)benzyl)carbamothioyl) pyrrolidin-1-yl)-1- thioxopropan-2-yl)acetamide (ligand 4)
PDB Compounds: (A:) Elongin-B

SCOPe Domain Sequences for d6fmka_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6fmka_ d.15.1.1 (A:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d6fmka_:

Click to download the PDB-style file with coordinates for d6fmka_.
(The format of our PDB-style files is described here.)

Timeline for d6fmka_:

  • d6fmka_ is new in SCOPe 2.07-stable