Lineage for d6cmmd_ (6cmm D:)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
    consists of two alpha+beta domains, C-terminal domain is mostly alpha helical
  4. Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families) (S)
    shares functional and structural similarities with the ATP-grasp fold and PIPK
  5. Family d.144.1.0: automated matches [191359] (1 protein)
    not a true family
  6. Protein automated matches [190417] (36 species)
    not a true protein
  7. Species Human (Homo sapiens) [TaxId:9606] [187294] (1454 PDB entries)
  8. Domain d6cmmd_: 6cmm D: [350687]
    automated match to d6bu6a_
    complexed with act, f7d, peg, so4

Details for d6cmmd_

PDB Entry: 6cmm (more details), 2.1 Å

PDB Description: crystal structure of the human vaccinia-related kinase bound to a n,n- dipropynyl-dihydropteridine inhibitor
PDB Compounds: (D:) Serine/threonine-protein kinase VRK1

SCOPe Domain Sequences for d6cmmd_:

Sequence, based on SEQRES records: (download)

>d6cmmd_ d.144.1.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
favgeiitdmaaaawkvglpigqggfgciyladmnssesvgsdapcvvkvepsdngplft
elkfyqraakpeqiqkwirtrklkylgvpkywgsglhdkngksyrfmimdrfgsdlqkiy
eanakrfsrktvlqlslrildileyiheheyvhgdikasnlllnyknpdqvylvdyglay
rycpegvhkayaadpkrchdgtieftsidahngvapsrrgdleilgycmiqwltghlpwe
dnlkdpkyvrdskiryreniaslmdkcfpaanapgeiakymetvklldytekplyenlrd
illqglkaigskddgkldl

Sequence, based on observed residues (ATOM records): (download)

>d6cmmd_ d.144.1.0 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
favgeiitdmaaaawkvglpigqciyladmnssesvgsdapcvvkvepsdngplftelkf
yqraakpeqiqkwirtrklkylgvpkywgsglhdkngksyrfmimdrfgsdlqkiyeana
krfsrktvlqlslrildileyiheheyvhgdikasnlllnyknpdqvylvdyglayrycp
egvhkayaadpkrchdgtieftsidahngvapsrrgdleilgycmiqwltghlpwednlk
dpkyvrdskiryreniaslmdkcfpaanapgeiakymetvklldytekplyenlrdillq
glkaigskddgkldl

SCOPe Domain Coordinates for d6cmmd_ are not available.

Timeline for d6cmmd_:

View in 3D
Domains from other chains:
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d6cmma_, d6cmmb_, d6cmmc_