SCOPe 2.08: Domain d6by0d1: 6by0 D:28-597

Lineage for d6by0d1 (6by0 D:28-597)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.5: Heme-dependent catalase-like [56633] (1 superfamily)
   contains an (8,10) beta-barrel and an all-alpha domain

4. Superfamily e.5.1: Heme-dependent catalase-like [56634] (3 families)

5. Family e.5.1.1: Heme-dependent catalases [56635] (3 proteins)

6. Protein Catalase II [56642] (1 species)
   contains additional flavodoxin-like domain at C-terminus

7. Species Escherichia coli, HPII [TaxId:562] [56643] (17 PDB entries)

8. Domain d6by0d1: 6by0 D:28-597 [349911]
   Other proteins in same PDB: d6by0a2, d6by0b2, d6by0c2, d6by0d2
   automated match to d1ggea2
   complexed with hem

Details for d6by0d1

PDB Entry: 6by0, 2.93 Å

PDB Description: crystal structure of catalase hpii from e. coli in space group p1

PDB Compounds: (D:) catalase hpii

SCOPe Domain Sequences for d6by0d1:

Sequence; same for both SEQRES and ATOM records:

>d6by0d1 e.5.1.1 (D:28-597) Catalase II {Escherichia coli, HPII [TaxId: 562]}
slapedgshrpaaeptppgaqptapgslkapdtrneklnsledvrkgsenyalttnqgvr
iaddqnslragsrgptlledfilrekithfdheriperivhargsaahgyfqpykslsdi
tkadflsdpnkitpvfvrfstvqggagsadtvrdirgfatkfyteegifdlvgnntpiff
iqdahkfpdfvhavkpephwaipqgqsahdtfwdyvslqpetlhnvmwamsdrgiprsyr
tmegfgihtfrlinaegkatfvrfhwkplagkaslvwdeaqkltgrdpdfhrrelweaie
agdfpeyelgfqlipeedefkfdfdlldptklipeelvpvqrvgkmvlnrnpdnffaene
qaafhpghivpgldftndpllqgrlfsytdtqisrlggpnfheipinrptcpyhnfqrdg
mhrmgidtnpanyepnsindnwpretppgpkrggfesyqervegnkvrerspsfgeyysh
prlfwlsqtpfeqrhivdgfsfelskvvrpyirervvdqlahidltlaqavaknlgielt
ddqlnitpppdvnglkkdpslslyaipdgd

Timeline for d6by0d1:

• d6by0d1 first appeared in SCOPe 2.07