Lineage for d6bkqa1 (6bkq A:11-329)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2370814Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2370815Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2371474Family b.19.1.0: automated matches [227246] (1 protein)
    not a true family
  6. 2371475Protein automated matches [227017] (44 species)
    not a true protein
  7. 2371579Species Influenza A virus (strain a/hong kong/1/1968 h3n2) [TaxId:506350] [327808] (14 PDB entries)
  8. 3049818Domain d6bkqa1: 6bkq A:11-329 [349880]
    Other proteins in same PDB: d6bkqa2, d6bkqb_, d6bkqc2, d6bkqd_, d6bkqe2, d6bkqf_
    automated match to d4xkga_
    complexed with bma, gal, man, nag, sia, tam; mutant

Details for d6bkqa1

PDB Entry: 6bkq (more details), 2.25 Å

PDB Description: crystal structure of the a/hong kong/1/1968 (h3n2) influenza virus hemagglutinin e190d mutant in complex with 6'-sln
PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d6bkqa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6bkqa1 b.19.1.0 (A:11-329) automated matches {Influenza A virus (strain a/hong kong/1/1968 h3n2) [TaxId: 506350]}
atlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrildgidctlidal
lgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlefitegftwtgv
tqnggsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiwgvhhpstnqd
qtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpgdvlvinsngn
liaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnkitygacpkyvk
qntlklatgmrnvpekqtr

SCOPe Domain Coordinates for d6bkqa1:

Click to download the PDB-style file with coordinates for d6bkqa1.
(The format of our PDB-style files is described here.)

Timeline for d6bkqa1:

  • d6bkqa1 appears in periodic updates to SCOPe 2.07 starting on 2018-04-07