SCOPe 2.08: Domain d6bkqc1: 6bkq C:11-325

Lineage for d6bkqc1 (6bkq C:11-325)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.0: automated matches [227246] (1 protein)
   not a true family

6. Protein automated matches [227017] (58 species)
   not a true protein

7. Species Influenza A virus (strain a/hong kong/1/1968 h3n2) [TaxId:506350] [327808] (18 PDB entries)

8. Domain d6bkqc1: 6bkq C:11-325 [349690]
   Other proteins in same PDB: d6bkqa2, d6bkqb_, d6bkqc2, d6bkqd_, d6bkqe2, d6bkqf_
   automated match to d4xkga_
   complexed with nag, tam; mutant

Details for d6bkqc1

PDB Entry: 6bkq, 2.25 Å

PDB Description: crystal structure of the a/hong kong/1/1968 (h3n2) influenza virus hemagglutinin e190d mutant in complex with 6'-sln

PDB Compounds: (C:) Hemagglutinin

SCOPe Domain Sequences for d6bkqc1:

Sequence; same for both SEQRES and ATOM records:

>d6bkqc1 b.19.1.0 (C:11-325) automated matches {Influenza A virus (strain a/hong kong/1/1968 h3n2) [TaxId: 506350]}
atlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrildgidctlidal
lgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlefitegftwtgv
tqnggsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiwgvhhpstnqd
qtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpgdvlvinsngn
liaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnkitygacpkyvk
qntlklatgmrnvpe

Timeline for d6bkqc1:

• d6bkqc1 first appeared in SCOPe 2.07