SCOPe 2.08: Domain d5z0tb2: 5z0t B:123-554

Lineage for d5z0tb2 (5z0t B:123-554)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein automated matches [190099] (31 species)
   not a true protein

7. Species Thermoactinomyces vulgaris [TaxId:2026] [254920] (8 PDB entries)

8. Domain d5z0tb2: 5z0t B:123-554 [349350]
   Other proteins in same PDB: d5z0ta1, d5z0ta3, d5z0tb1, d5z0tb3
   automated match to d1ji1a3
   complexed with ca, mpd; mutant

Details for d5z0tb2

PDB Entry: 5z0t, 1.5 Å

PDB Description: thermoactinomyces vulgaris r-47 alpha-amylase i (tva i) mutant a357v/q359n/y360e (aqy/vne)

PDB Compounds: (B:) Neopullulanase 1

SCOPe Domain Sequences for d5z0tb2:

Sequence; same for both SEQRES and ATOM records:

>d5z0tb2 c.1.8.1 (B:123-554) automated matches {Thermoactinomyces vulgaris [TaxId: 2026]}
nfktpdwlkngvmyqifpdrfyngdssndvqtgsytyngtptekkawgssvyadpgydns
lvffggdlagidqklgyikktlganilylnpifkaptnhkydtqdymavdpafgdnstlq
tlindihstangpkgylildgvfnhtgdshpwfdkynnfssqgayesqsspwynyytfyt
wpdsyasflgfnslpklnygnsgsavrgviynnsnsvaktylnppysvdgwrldvanevd
angnngsdvtnhqiwsefrnavkgvnsnaaiigeywgnanpwtaqgnqwdaatnfdgftq
pvsewitgkdyqnnsasisttqfdswlrgtranyptnvqqsmmnflsnhditrfatrsgg
dlwktylalifqmtyvgtptiyygdeygmqggadpdnrrsfdwsqatpsnsavaltqkli
tirnqypalrtg

Timeline for d5z0tb2:

• d5z0tb2 first appeared in SCOPe 2.07