SCOPe 2.08: Domain d5y3ab_: 5y3a B:

Lineage for d5y3ab_ (5y3a B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.110: Profilin-like [55769] (10 superfamilies)
   core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha

4. Superfamily d.110.7: Roadblock/LC7 domain [103196] (2 families)
   alpha-beta(2)-alpha-beta(3)-alpha; structurally most similar to the SNARE-like superfamily with a circular permutation of the terminal helices

5. Family d.110.7.1: Roadblock/LC7 domain [103197] (5 proteins)
   Pfam PF03259

6. Protein automated matches [190414] (3 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187290] (12 PDB entries)

8. Domain d5y3ab_: 5y3a B: [348684]
   automated match to d1szva_
   complexed with so4

Details for d5y3ab_

PDB Entry: 5y3a, 2.9 Å

PDB Description: crystal structure of ragulator complex (p18 49-161)

PDB Compounds: (B:) Ragulator complex protein LAMTOR2

SCOPe Domain Sequences for d5y3ab_:

Sequence, based on SEQRES records:

>d5y3ab_ d.110.7.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
altqvlsqantggvqstlllnnegsllaysgygdtdarvtaaiasniwaaydrngnqafn
ednlkfilmdcmegrvaitrvanlllcmyaketvgfgmlkakaqalvqyleeplt

Sequence, based on observed residues (ATOM records):

>d5y3ab_ d.110.7.1 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
altqvlsqantggvqstlllnnegsllaysgygdtdarvtaaiasniwaaydrngnqafd
nlkfilmdcmegrvaitrvanlllcmyaketvgfgmlkakaqalvqyleeplt

Timeline for d5y3ab_:

• d5y3ab_ first appeared in SCOPe 2.07