Lineage for d5x3va_ (5x3v A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2895166Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2895167Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2896011Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
    formerly omega-Aminoacid:pyruvate aminotransferase-like
  6. 2896255Protein Serine hydroxymethyltransferase [53429] (7 species)
  7. 2896310Species Human (Homo sapiens), mitochondrial [TaxId:9606] [142671] (9 PDB entries)
    Uniprot P34897 42-504
  8. 2896323Domain d5x3va_: 5x3v A: [348376]
    automated match to d3ou5a_
    complexed with so4; mutant

Details for d5x3va_

PDB Entry: 5x3v (more details), 2.85 Å

PDB Description: structure of human shmt2 protein mutant
PDB Compounds: (A:) Serine hydroxymethyltransferase, mitochondrial

SCOPe Domain Sequences for d5x3va_:

Sequence, based on SEQRES records: (download)

>d5x3va_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
wtgqeslsdsdpemwellqrekdrqcrgleliasenfcsraalealgsclnnrysegypg
kryyggaevvdeiellcqrraleafdldpaqwgvnvqpysgspanlavytallqphdrim
gldlpdgghlthgymsdvkrisatsiffesmpyklnpktglidynqlaltarlfrprlii
agtsayarlidyarmrevcdevkahlladmahisglvaakvipspfkhadivtttthktl
rgarsglifyrkgvkavdpktgreipytfedrinfavfpslqggphnhaiaavavalkqa
ctpmfreyslqvlknaramadallergyslvsggtdnhlvlvdlrpkgldgaraervlel
vsitankntcpgdrsaitpgglrlgapaltsrqfreddfrrvvdfidegvniglevkskt
aklqdfksfllkdsetsqrlanlrqrveqfarafpmpgfdeh

Sequence, based on observed residues (ATOM records): (download)

>d5x3va_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
wtgqeslsdsdpemwellqrekdrqcrgleliasenfcsraalealgsclnnrysegypg
kryyggaevvdeiellcqrraleafdldpaqwgvnvqpysgspanlavytallqphdrim
gldlpdgghltisatsiffesmpyklnpktglidynqlaltarlfrprliiagtsayarl
idyarmrevcdevkahlladmahisglvaakvipspfkhadivtttthktlrgarsglif
yrkgvkeipytfedrinfavfpslqggphnhaiaavavalkqactpmfreyslqvlknar
amadallergyslvsggtdnhlvlvdlrpkgldgaraervlelvsitankntcpgdrsai
tpgglrlgapaltsrqfreddfrrvvdfidegvniglevksktaklqdfksfllkdsets
qrlanlrqrveqfarafpmpgfdeh

SCOPe Domain Coordinates for d5x3va_:

Click to download the PDB-style file with coordinates for d5x3va_.
(The format of our PDB-style files is described here.)

Timeline for d5x3va_: