SCOPe 2.08: Domain d5wskd2: 5wsk D:150-464

Lineage for d5wskd2 (5wsk D:150-464)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein automated matches [226984] (16 species)
   not a true protein

7. Species Wheat (Triticum aestivum) [TaxId:4565] [348226] (1 PDB entry)

8. Domain d5wskd2: 5wsk D:150-464 [348338]
   Other proteins in same PDB: d5wska1, d5wskb1, d5wskc1, d5wskd1, d5wske_, d5wskf_, d5wskg_, d5wskh_
   automated match to d1ir2a1
   complexed with mg

Details for d5wskd2

PDB Entry: 5wsk, 1.78 Å

PDB Description: structure of ribulose-1,5-bisphosphate carboxylase/oxygenase from wheat

PDB Compounds: (D:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d5wskd2:

Sequence, based on SEQRES records:

>d5wskd2 c.1.14.1 (D:150-464) automated matches {Wheat (Triticum aestivum) [TaxId: 4565]}
gpphgiqverdklnkygrpllgctikpklglsaknygracyeclrggldftkddenvnsq
pfmrwrdrfvfcaeaiyksqaetgeikghylnatagtceemikravfarelgvpivmhdy
ltggftanttlahycrdnglllhihramhavidrqknhgmhfrvlakalrmsggdhihsg
tvvgklegeremtlgfvdllrddfiekdrargifftqdwvsmpgvipvasggihvwhmpa
lteifgddsvlqfgggtlghpwgnapgaaanrvaleacvqarnegrdlaregneiiraac
kwspelaaacevwka

Sequence, based on observed residues (ATOM records):

>d5wskd2 c.1.14.1 (D:150-464) automated matches {Wheat (Triticum aestivum) [TaxId: 4565]}
gpphgiqverdklnkygrpllgctikpklglsaknygracyeclrggldftkddenvnsq
pfmrwrdrfvfcaeaiyksqaetgeikghylnatagtceemikravfarelgvpivmhdy
ltggftanttlahycrdnglllhihramhavidrqknhgmhfrvlakalrmsggdhihsg
tvvggeremtlgfvdllrddfiekdrargifftqdwvsmpgvipvasggihvwhmpalte
ifgddsvlqfgggtlghpwgnapgaaanrvaleacvqarnegrdlaregneiiraackws
pelaaacevwka

Timeline for d5wskd2:

• d5wskd2 first appeared in SCOPe 2.07