SCOPe 2.07: Domain d5wczb1: 5wcz B:3-482

Lineage for d5wczb1 (5wcz B:3-482)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein automated matches [190099] (33 species)
   not a true protein

7. Species Bacillus subtilis [TaxId:224308] [228099] (5 PDB entries)

8. Domain d5wczb1: 5wcz B:3-482 [348003]
   Other proteins in same PDB: d5wcza2, d5wczb2
   automated match to d4m8ua1
   complexed with gol, noj

Details for d5wczb1

PDB Entry: 5wcz, 1.58 Å

PDB Description: crystal structure of wild-type mall from bacillus subtilis with ts analogue 1-deoxynojirimycin

PDB Compounds: (B:) Oligo-1,6-glucosidase 1

SCOPe Domain Sequences for d5wczb1:

Sequence, based on SEQRES records:

>d5wczb1 c.1.8.1 (B:3-482) automated matches {Bacillus subtilis [TaxId: 224308]}
ewwkeavvyqiyprsfydangdgfgdlqgviqkldyiknlgadviwlspvfdspqddngy
disdyknmyekfgtnedmfqlidevhkrgmkivmdlvvnhtsdehawfaesrkskdnpyr
dyylwkdpkpdgsepnnwgsifsgsawtydegtgqyylhyfskkqpdlnweneavrrevy
dvmrfwmdrgvdgwrmdvigsiskytdfpdyetdhsrsyivgryhsngprlhefiqemnr
evlshydcmtvgeangsdieeakkytdasrqelnmiftfehmdidkeqnspngkwqikpf
dlialkktmtrwqtglmnvgwntlyfenhdqprvisrwgndrklrkecakafatvlhgmk
gtpfiyqgeeigmvnsdmplemyddleiknayrelvvenktmsekefvkavmikgrdhar
tpmqwdagkhagftagdpwipvnsryqdinvkesledqdsiffyyqkliqlrkqykimiy

Sequence, based on observed residues (ATOM records):

>d5wczb1 c.1.8.1 (B:3-482) automated matches {Bacillus subtilis [TaxId: 224308]}
ewwkeavvyqiyprsfydangdgfgdlqgviqkldyiknlgadviwlspvfdspqddngy
disdyknmyekfgtnedmfqlidevhkrgmkivmdlvvnhtsdehawfaesrkskdnpyr
dyylwkdpkpdsepnnwgsifsgsawtydegtgqyylhyfskkqpdlnweneavrrevyd
vmrfwmdrgvdgwrmdvigsiskytdfpdyetsyivgryhsngprlhefiqemnrevlsh
ydcmtvgeangsdieeakkytdasrqelnmiftfehmdidkeqnspngkwqikpfdlial
kktmtrwqtglmnvgwntlyfenhdqprvisrwgndrklrkecakafatvlhgmkgtpfi
yqgeeigmvnsdmplemyddleiknayrelvvenktmsekefvkavmikgrdhartpmqw
dagkhagftagdpwipvnsryqdinvkesledqdsiffyyqkliqlrkqykimiy

Timeline for d5wczb1:

• d5wczb1 is new in SCOPe 2.07-stable
  
• d5wczb1 appears in the current release, SCOPe 2.08