Lineage for d5ooga_ (5oog A:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2426096Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2426097Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2426443Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 protein domains)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
  6. 2426753Protein Biliverdin IX beta reductase [63931] (1 species)
    Histidine in the active site instead of the Tyr-Lys dyad
  7. 2426754Species Human (Homo sapiens) [TaxId:9606] [63932] (7 PDB entries)
  8. 3047861Domain d5ooga_: 5oog A: [347923]
    automated match to d1hdoa_
    complexed with a0b, gol, nap, po4

Details for d5ooga_

PDB Entry: 5oog (more details), 1.33 Å

PDB Description: human biliverdin ix beta reductase: nadp/phloxine b ternary complex
PDB Compounds: (A:) Flavin reductase (NADPH)

SCOPe Domain Sequences for d5ooga_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ooga_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}
avkkiaifgatgqtglttlaqavqagyevtvlvrdssrlpsegprpahvvvgdvlqaadv
dktvagqdavivllgtrndlspttvmsegarnivaamkahgvdkvvactsafllwdptkv
pprlqavtddhirmhkvlresglkyvavmpphigdqpltgaytvtldgrgpsrviskhdl
ghfmlrclttdeydghstypshqyq

SCOPe Domain Coordinates for d5ooga_:

Click to download the PDB-style file with coordinates for d5ooga_.
(The format of our PDB-style files is described here.)

Timeline for d5ooga_:

  • d5ooga_ appears in periodic updates to SCOPe 2.07 starting on 2018-04-06