Lineage for d5oyla_ (5oyl A:)

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3020820Fold e.76: Viral glycoprotein ectodomain-like [161007] (1 superfamily)
    complex fold; contains three rigid, mostly-beta domains and an alpha-helical region, acting as a conformatiomal switch ("fusion stalk")
  4. 3020821Superfamily e.76.1: Viral glycoprotein ectodomain-like [161008] (3 families) (S)
  5. 3020850Family e.76.1.2: Spike glycoprotein-like [161012] (1 protein)
    Pfam PF00974; Rhabdovirus spike glycoprotein
  6. 3020851Protein Spike glycoprotein [161013] (2 species)
  7. 3020852Species Recombinant vesicular stomatitis indiana virus rvsv-g/gfp [TaxId:582817] [347606] (2 PDB entries)
  8. 3020854Domain d5oyla_: 5oyl A: [347607]
    Other proteins in same PDB: d5oyld1, d5oyld2
    automated match to d5i2sa_
    complexed with ca, gol, nag

Details for d5oyla_

PDB Entry: 5oyl (more details), 2.25 Å

PDB Description: vsv g cr2
PDB Compounds: (A:) Glycoprotein

SCOPe Domain Sequences for d5oyla_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5oyla_ e.76.1.2 (A:) Spike glycoprotein {Recombinant vesicular stomatitis indiana virus rvsv-g/gfp [TaxId: 582817]}
kftivfphnqkgnwknvpsnyhycpsssdlnwhndligtalqvkmpkshkaiqadgwmch
askwvttcdfrwygpkyithsirsftpsveqckesieqtkqgtwlnpgfppqscgyatvt
daeavivqvtphhvlvdeytgewvdsqfingkcsnyicptvhnsttwhsdykvkglcdsn
lismditffsedgelsslgkegtgfrsnyfayetggkackmqyckhwgvrlpsgvwfema
dkdlfaaarfpecpegssisapsqtsvdvsliqdverildyslcqetwskiraglpispv
dlsylapknpgtgpaftiingtlkyfetryirvdiaapilsrmvgmisgttterelwddw
apyedveigpngvlrtssgykfplymighgmldsdlhlsskaqvfehphi

SCOPe Domain Coordinates for d5oyla_:

Click to download the PDB-style file with coordinates for d5oyla_.
(The format of our PDB-style files is described here.)

Timeline for d5oyla_: