Lineage for Species: Human immunodeficiency virus 1 [TaxId: 11676]

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2392350Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2394036Superfamily b.34.7: DNA-binding domain of retroviral integrase [50122] (2 families) (S)
  5. 2394037Family b.34.7.1: DNA-binding domain of retroviral integrase [50123] (2 proteins)
  6. 2394057Protein automated matches [347599] (2 species)
    not a true protein
  7. 2394058Species Human immunodeficiency virus 1 [TaxId:11676] [347600] (4 PDB entries)

PDB entries in Species: Human immunodeficiency virus 1 [TaxId: 11676]:

  1. Domain(s) for 5tc2:
    1. 2394063Domain d5tc2a_: 5tc2 A: [347601]
      automated match to d1c6vx_
      complexed with gol
    2. 2394064Domain d5tc2b_: 5tc2 B: [347682]
      automated match to d1c6vx_
      complexed with gol
  2. Domain(s) for 6t6e:
  3. Domain(s) for 6t6i:
  4. Domain(s) for 6t6j:
    1. 2394060Domain d6t6ja1: 6t6j A:219-270 [391834]
      Other proteins in same PDB: d6t6ja2, d6t6jb2, d6t6jc2
      automated match to d1c6vx_
      complexed with ni; mutant
    2. 2394061Domain d6t6jb1: 6t6j B:219-270 [391820]
      Other proteins in same PDB: d6t6ja2, d6t6jb2, d6t6jc2
      automated match to d1c6vx_
      complexed with ni; mutant
    3. 2394062Domain d6t6jc1: 6t6j C:219-270 [391837]
      Other proteins in same PDB: d6t6ja2, d6t6jb2, d6t6jc2
      automated match to d1c6vx_
      complexed with ni; mutant

More info for Species Human immunodeficiency virus 1 [TaxId:11676] from b.34.7.1 automated matches

Timeline for Species Human immunodeficiency virus 1 [TaxId:11676] from b.34.7.1 automated matches:

  • Species Human immunodeficiency virus 1 [TaxId:11676] from b.34.7.1 automated matches is new in SCOPe 2.07-stable
  • Species Human immunodeficiency virus 1 [TaxId:11676] from b.34.7.1 automated matches does not appear in SCOPe 2.08