SCOPe 2.08: Domain d5okdd1: 5okd D:2-195

Lineage for d5okdd1 (5okd D:2-195)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.3: Cytochrome c [46625] (1 superfamily)
   core: 3 helices; folded leaf, opened

4. Superfamily a.3.1: Cytochrome c [46626] (9 families)
   covalently-bound heme completes the core

5. Family a.3.1.3: Cytochrome bc1 domain [46676] (2 proteins)

6. Protein automated matches [232767] (3 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [254893] (2 PDB entries)

8. Domain d5okdd1: 5okd D:2-195 [347263]
   Other proteins in same PDB: d5okda1, d5okda2, d5okdb1, d5okdb2, d5okdc1, d5okdc2, d5okdd2, d5okde1, d5okde2, d5okdg_, d5okdh_, d5okdi_, d5okdj_
   automated match to d2a06d1
   complexed with 6pe, 9xe, cdl, fes, hec, hem, lmt, pee, pg4, po4, px4

Details for d5okdd1

PDB Entry: 5okd, 3.1 Å

PDB Description: crystal structure of bovine cytochrome bc1 in complex with inhibitor scr0911.

PDB Compounds: (D:) Cytochrome c1, heme protein, mitochondrial

SCOPe Domain Sequences for d5okdd1:

Sequence; same for both SEQRES and ATOM records:

>d5okdd1 a.3.1.3 (D:2-195) automated matches {Cow (Bos taurus) [TaxId: 9913]}
dlelhppsypwshrgllssldhtsirrgfqvykqvcsschsmdyvayrhlvgvcytedea
kalaeevevqdgpnedgemfmrpgklsdyfpkpypnpeaaraanngalppdlsyivrarh
ggedyvfslltgycepptgvslreglyfnpyfpgqaigmappiynevlefddgtpatmsq
vakdvctflrwaae

Timeline for d5okdd1:

• d5okdd1 first appeared in SCOPe 2.07