Class b: All beta proteins [48724] (180 folds) |
Fold b.42: beta-Trefoil [50352] (8 superfamilies) barrel, closed; n=6, S=12; and a hairpin triplet; meander duplication: has internal pseudo threefold symmetry |
Superfamily b.42.4: STI-like [50386] (3 families) |
Family b.42.4.2: Clostridium neurotoxins, C-terminal domain [50399] (3 proteins) overall fold is very similar to that of the STI family automatically mapped to Pfam PF07951 |
Protein automated matches [229100] (6 species) not a true protein |
Species Clostridium botulinum [TaxId:1491] [229101] (14 PDB entries) |
Domain d5mk8a2: 5mk8 A:1072-1288 [346935] Other proteins in same PDB: d5mk8a1, d5mk8b1 automated match to d5v38a2 complexed with cl, fmt |
PDB Entry: 5mk8 (more details), 1.95 Å
SCOPe Domain Sequences for d5mk8a2:
Sequence, based on SEQRES records: (download)
>d5mk8a2 b.42.4.2 (A:1072-1288) automated matches {Clostridium botulinum [TaxId: 1491]} nkkeikdlydnqsnsgilkdfwgdylqydkpyymlnlydpnkyldvnnvgirgymylkgp rgrivttniylnstlymgtkfiikkyasgnkdnivrnndrvyinvvvknkeyrlatnasq agvekilsaveipdvgnlsqvvvmksendqgirnkckmnlqdnngndigfigfhqfnnia klvasnwynrqigkasrtfgcswefipvddgwgessl
>d5mk8a2 b.42.4.2 (A:1072-1288) automated matches {Clostridium botulinum [TaxId: 1491]} nkkeikdlydnqsnsgilkdfwgdylqydkpyymlnlydpnkyldvnnvgirgymylkgp rgrivttniylnstlymgtkfiikkyasgnkdnivrnndrvyinvvvknkeyrlatnasq agvekilsaveipdvgnlsqvvvmksenkckmnlqdnngndigfigfhqfnniaklvasn wynrqigkasrtfgcswefipvddgwgessl
Timeline for d5mk8a2: