Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2918481Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2918897Superfamily c.97.3: JAB1/MPN domain [102712] (2 families) (S)
  5. 2918898Family c.97.3.1: JAB1/MPN domain [102713] (8 proteins)
    Pfam PF01398; Pfam PF14464; synonyms Mov34, PAD-1. PubMed 17559875 asserts homology to (c.97.1)
  6. 2918930Protein Proteasome regulatory subunit Rpn8 [346089] (1 species)
  7. 2918931Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346339] (9 PDB entries)

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]:

  1. Domain(s) for 4cr2:
  2. Domain(s) for 4o8x:
  3. Domain(s) for 4o8y:
  4. Domain(s) for 4ocl:
    1. 2918937Domain d4ocla_: 4ocl A: [263271]
      Other proteins in same PDB: d4oclb_, d4oclc1, d4oclc2, d4oclc3, d4ocle_, d4oclf1, d4oclf2, d4oclf3
      automated match to d2o95a_
      complexed with zn
    2. 2918938Domain d4ocld_: 4ocl D: [263272]
      Other proteins in same PDB: d4oclb_, d4oclc1, d4oclc2, d4oclc3, d4ocle_, d4oclf1, d4oclf2, d4oclf3
      automated match to d2o95a_
      complexed with zn
  5. Domain(s) for 4ocm:
    1. 2918935Domain d4ocma_: 4ocm A: [263273]
      Other proteins in same PDB: d4ocmb_, d4ocmc1, d4ocmc2, d4ocmc3, d4ocme_, d4ocmf1, d4ocmf2, d4ocmf3
      automated match to d2o95a_
      complexed with k, zn
    2. 2918936Domain d4ocmd_: 4ocm D: [263274]
      Other proteins in same PDB: d4ocmb_, d4ocmc1, d4ocmc2, d4ocmc3, d4ocme_, d4ocmf1, d4ocmf2, d4ocmf3
      automated match to d2o95a_
      complexed with k, zn
  6. Domain(s) for 4ocn:
    1. 2918939Domain d4ocna_: 4ocn A: [263275]
      Other proteins in same PDB: d4ocnb_, d4ocnc1, d4ocnc2, d4ocnc3, d4ocne_, d4ocnf1, d4ocnf2, d4ocnf3
      automated match to d2o95a_
    2. 2918940Domain d4ocnd_: 4ocn D: [263276]
      Other proteins in same PDB: d4ocnb_, d4ocnc1, d4ocnc2, d4ocnc3, d4ocne_, d4ocnf1, d4ocnf2, d4ocnf3
      automated match to d2o95a_
  7. Domain(s) for 4owp:
  8. Domain(s) for 5u4p:
  9. Domain(s) for 5w83:

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from c.97.3.1 Proteasome regulatory subunit Rpn8

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from c.97.3.1 Proteasome regulatory subunit Rpn8: