Lineage for Species: Candida glabrata [TaxId: 5478]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2807206Fold b.65: triple barrel [50915] (1 superfamily)
    dimer of two non-identical subunits; forms two similar barrels, n=8, S=10 each, that are fused together with the formation of third barrel, n=6, S=8
  4. 2807207Superfamily b.65.1: Rap30/74 interaction domain-like [50916] (3 families) (S)
  5. 2807221Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains [345965] (3 proteins)
    Homology with TFIIF discussed in PubMed 20797630
  6. 2807222Protein RNA polymerase I subunit A34.5, interaction domain [346057] (2 species)
    N-terminal part of Pfam PF08208
    Extended C-terminal part of this domain disordered in some structures
  7. 2807227Species Candida glabrata [TaxId:5478] [346251] (2 PDB entries)

PDB entries in Species: Candida glabrata [TaxId: 5478]:

  1. Domain(s) for 3nff:
    1. 2807236Domain d3nffb_: 3nff B: [344922]
      Other proteins in same PDB: d3nffa_, d3nffc_, d3nffe_, d3nffg_
      protein/RNA complex
    2. 2807237Domain d3nffd_: 3nff D: [344924]
      Other proteins in same PDB: d3nffa_, d3nffc_, d3nffe_, d3nffg_
      protein/RNA complex
    3. 2807238Domain d3nfff_: 3nff F: [344926]
      Other proteins in same PDB: d3nffa_, d3nffc_, d3nffe_, d3nffg_
      protein/RNA complex
    4. 2807239Domain d3nffh_: 3nff H: [344928]
      Other proteins in same PDB: d3nffa_, d3nffc_, d3nffe_, d3nffg_
      protein/RNA complex
  2. Domain(s) for 3nfg:
    1. 2807228Domain d3nfgb1: 3nfg B:25-143 [344930]
      Other proteins in same PDB: d3nfga_, d3nfgb2, d3nfgc_, d3nfgd2, d3nfge_, d3nfgf2, d3nfgg_, d3nfgh2, d3nfgi_, d3nfgj2, d3nfgk_, d3nfgl2, d3nfgm_, d3nfgn2, d3nfgo_
      automated match to d3nffh_
      protein/RNA complex
    2. 2807229Domain d3nfgd1: 3nfg D:25-143 [344933]
      Other proteins in same PDB: d3nfga_, d3nfgb2, d3nfgc_, d3nfgd2, d3nfge_, d3nfgf2, d3nfgg_, d3nfgh2, d3nfgi_, d3nfgj2, d3nfgk_, d3nfgl2, d3nfgm_, d3nfgn2, d3nfgo_
      automated match to d3nffh_
      protein/RNA complex
    3. 2807230Domain d3nfgf1: 3nfg F:25-143 [344936]
      Other proteins in same PDB: d3nfga_, d3nfgb2, d3nfgc_, d3nfgd2, d3nfge_, d3nfgf2, d3nfgg_, d3nfgh2, d3nfgi_, d3nfgj2, d3nfgk_, d3nfgl2, d3nfgm_, d3nfgn2, d3nfgo_
      automated match to d3nffh_
      protein/RNA complex
    4. 2807231Domain d3nfgh1: 3nfg H:25-143 [344939]
      Other proteins in same PDB: d3nfga_, d3nfgb2, d3nfgc_, d3nfgd2, d3nfge_, d3nfgf2, d3nfgg_, d3nfgh2, d3nfgi_, d3nfgj2, d3nfgk_, d3nfgl2, d3nfgm_, d3nfgn2, d3nfgo_
      automated match to d3nffh_
      protein/RNA complex
    5. 2807232Domain d3nfgj1: 3nfg J:25-143 [344942]
      Other proteins in same PDB: d3nfga_, d3nfgb2, d3nfgc_, d3nfgd2, d3nfge_, d3nfgf2, d3nfgg_, d3nfgh2, d3nfgi_, d3nfgj2, d3nfgk_, d3nfgl2, d3nfgm_, d3nfgn2, d3nfgo_
      automated match to d3nffh_
      protein/RNA complex
    6. 2807233Domain d3nfgl1: 3nfg L:25-143 [344945]
      Other proteins in same PDB: d3nfga_, d3nfgb2, d3nfgc_, d3nfgd2, d3nfge_, d3nfgf2, d3nfgg_, d3nfgh2, d3nfgi_, d3nfgj2, d3nfgk_, d3nfgl2, d3nfgm_, d3nfgn2, d3nfgo_
      automated match to d3nffh_
      protein/RNA complex
    7. 2807234Domain d3nfgn1: 3nfg N:25-143 [344948]
      Other proteins in same PDB: d3nfga_, d3nfgb2, d3nfgc_, d3nfgd2, d3nfge_, d3nfgf2, d3nfgg_, d3nfgh2, d3nfgi_, d3nfgj2, d3nfgk_, d3nfgl2, d3nfgm_, d3nfgn2, d3nfgo_
      automated match to d3nffh_
      protein/RNA complex
    8. 2807235Domain d3nfgp_: 3nfg P: [344951]
      Other proteins in same PDB: d3nfga_, d3nfgb2, d3nfgc_, d3nfgd2, d3nfge_, d3nfgf2, d3nfgg_, d3nfgh2, d3nfgi_, d3nfgj2, d3nfgk_, d3nfgl2, d3nfgm_, d3nfgn2, d3nfgo_
      automated match to d3nffh_
      protein/RNA complex

More info for Species Candida glabrata [TaxId:5478] from b.65.1.2 RNA polymerase I subunit A34.5, interaction domain

Timeline for Species Candida glabrata [TaxId:5478] from b.65.1.2 RNA polymerase I subunit A34.5, interaction domain: