Lineage for Protein: CRISPR-associated endonuclease Cas9/Csn1, PI domain

  1. Root: SCOPe 2.07
  2. 2618030Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2626563Fold e.80: CRISPR-associated endonuclease Cas9/Csn1, Protospace-adjacent motif (PAM)-interacting domain [345893] (1 superfamily)
    N-terminal part is structurally divergent wedge domain; middle domain is homologous to DNA gyrase B and Topoisomerase II; C-terminal domain appears to be Cas9-specific
  4. 2626564Superfamily e.80.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain [345926] (1 family) (S)
    Pfam PF16595
  5. 2626565Family e.80.1.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain [345982] (1 protein)
  6. 2626566Protein CRISPR-associated endonuclease Cas9/Csn1, PI domain [346119] (3 species)

Species:

  1. 2626567Actinomyces naeslundii [TaxId:1115803] [346416] (1 PDB entry)
  2. 2626569Staphylococcus aureus subsp. aureus [TaxId:46170] [346417] (1 PDB entry)
  3. 2626571Streptococcus pyogenes [TaxId:301447] [346418] (2 PDB entries)
    1. Domains for 4cmp:
      1. 2626574Domain d4cmpa4: 4cmp A:1137-1363 [345147]
        Other proteins in same PDB: d4cmpa1, d4cmpa2, d4cmpa3, d4cmpb1, d4cmpb2, d4cmpb3
        complexed with mg, so4
      2. 2626575Domain d4cmpb4: 4cmp B:1137-1363 [345151]
        Other proteins in same PDB: d4cmpa1, d4cmpa2, d4cmpa3, d4cmpb1, d4cmpb2, d4cmpb3
        automated match to d4cmpa4
        complexed with mg, so4
    2. Domains for 4oo8:
      1. 2626572Domain d4oo8a4: 4oo8 A:1103-1366 [345382]
        Other proteins in same PDB: d4oo8a1, d4oo8a2, d4oo8a3, d4oo8d1, d4oo8d2
        protein/DNA complex; protein/RNA complex
      2. 2626573Domain d4oo8d3: 4oo8 D:1103-1366 [345385]
        Other proteins in same PDB: d4oo8a1, d4oo8a2, d4oo8a3, d4oo8d1, d4oo8d2
        automated match to d4oo8a4
        protein/DNA complex; protein/RNA complex

More info for Protein CRISPR-associated endonuclease Cas9/Csn1, PI domain from e.80.1.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain

Timeline for Protein CRISPR-associated endonuclease Cas9/Csn1, PI domain from e.80.1.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain:

  • Protein CRISPR-associated endonuclease Cas9/Csn1, PI domain from e.80.1.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain is new in SCOPe 2.07-stable
  • Protein CRISPR-associated endonuclease Cas9/Csn1, PI domain from e.80.1.1: CRISPR-associated endonuclease Cas9/Csn1, PAM-interacting (PI) domain appears in the current release, SCOPe 2.08