SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families)
"palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain

Family e.8.1.8: Splicing factor Prp8 RT domain [345981] (2 proteins)
Pfam PF10598, Pfam PF10597. Includes linker domain discussed in PubMed 23354046
Homology to retroviral RT domains discussed in PubMed 21441348

Protein automated matches [346116] (1 species)
not a true protein

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346408] (1 PDB entry)
- Domain for 3zef:
  - Domain d3zefb1: 3zef B:885-1652 [345045]
    Other proteins in same PDB: d3zefa1, d3zefa2, d3zefb2, d3zefb3, d3zefb4, d3zefb5, d3zefd1, d3zefd2
    automated match to d4i43b4
    protein/RNA complex

More info for Protein automated matches from e.8.1.8: Splicing factor Prp8 RT domain

Timeline for Protein automated matches from e.8.1.8: Splicing factor Prp8 RT domain:

Protein automated matches from e.8.1.8: Splicing factor Prp8 RT domain first appeared in SCOPe 2.07