Lineage for Protein: RNA polymerase I subunit A49, interaction domain

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2397876Fold b.65: triple barrel [50915] (1 superfamily)
    dimer of two non-identical subunits; forms two similar barrels, n=8, S=10 each, that are fused together with the formation of third barrel, n=6, S=8
  4. 2397877Superfamily b.65.1: Rap30/74 interaction domain-like [50916] (3 families) (S)
  5. 2397891Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains [345965] (3 proteins)
    Homology with TFIIF discussed in PubMed 20797630
  6. 2397910Protein RNA polymerase I subunit A49, interaction domain [346058] (2 species)
    N-terminal part of Pfam PF06870

Species:

  1. 2397911Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346252] (2 PDB entries)
    1. Domains for 4c2m:
      1. 2397912Domain d4c2m2_: 4c2m 2: [343917]
        Other proteins in same PDB: d4c2m1_, d4c2m3_, d4c2ma_, d4c2mb_, d4c2mc1, d4c2mc2, d4c2me1, d4c2me2, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mj_, d4c2mk_, d4c2ml_, d4c2mn_, d4c2mp_, d4c2mq_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mt2, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2my_, d4c2mz_
        automated match to d4c3hm_
        complexed with so4, zn
      2. 2397913Domain d4c2mm_: 4c2m M: [343926]
        Other proteins in same PDB: d4c2m1_, d4c2m3_, d4c2ma_, d4c2mb_, d4c2mc1, d4c2mc2, d4c2me1, d4c2me2, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mj_, d4c2mk_, d4c2ml_, d4c2mn_, d4c2mp_, d4c2mq_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mt2, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2my_, d4c2mz_
        automated match to d4c3hm_
        complexed with so4, zn
    2. Domain for 4c3h:
  2. 2397915Candida glabrata [TaxId:5478] [346253] (2 PDB entries)
    1. Domains for 3nff:
      1. 2397924Domain d3nffa_: 3nff A: [344921]
        Other proteins in same PDB: d3nffb_, d3nffd_, d3nfff_, d3nffh_
        protein/RNA complex
      2. 2397925Domain d3nffc_: 3nff C: [344923]
        Other proteins in same PDB: d3nffb_, d3nffd_, d3nfff_, d3nffh_
        protein/RNA complex
      3. 2397926Domain d3nffe_: 3nff E: [344925]
        Other proteins in same PDB: d3nffb_, d3nffd_, d3nfff_, d3nffh_
        protein/RNA complex
      4. 2397927Domain d3nffg_: 3nff G: [344927]
        Other proteins in same PDB: d3nffb_, d3nffd_, d3nfff_, d3nffh_
        protein/RNA complex
    2. Domains for 3nfg:
      1. 2397916Domain d3nfga_: 3nfg A: [344929]
        Other proteins in same PDB: d3nfgb1, d3nfgb2, d3nfgd1, d3nfgd2, d3nfgf1, d3nfgf2, d3nfgh1, d3nfgh2, d3nfgj1, d3nfgj2, d3nfgl1, d3nfgl2, d3nfgn1, d3nfgn2, d3nfgp_
        automated match to d3nffa_
        protein/RNA complex
      2. 2397917Domain d3nfgc_: 3nfg C: [344932]
        Other proteins in same PDB: d3nfgb1, d3nfgb2, d3nfgd1, d3nfgd2, d3nfgf1, d3nfgf2, d3nfgh1, d3nfgh2, d3nfgj1, d3nfgj2, d3nfgl1, d3nfgl2, d3nfgn1, d3nfgn2, d3nfgp_
        automated match to d3nffa_
        protein/RNA complex
      3. 2397918Domain d3nfge_: 3nfg E: [344935]
        Other proteins in same PDB: d3nfgb1, d3nfgb2, d3nfgd1, d3nfgd2, d3nfgf1, d3nfgf2, d3nfgh1, d3nfgh2, d3nfgj1, d3nfgj2, d3nfgl1, d3nfgl2, d3nfgn1, d3nfgn2, d3nfgp_
        automated match to d3nffa_
        protein/RNA complex
      4. 2397919Domain d3nfgg_: 3nfg G: [344938]
        Other proteins in same PDB: d3nfgb1, d3nfgb2, d3nfgd1, d3nfgd2, d3nfgf1, d3nfgf2, d3nfgh1, d3nfgh2, d3nfgj1, d3nfgj2, d3nfgl1, d3nfgl2, d3nfgn1, d3nfgn2, d3nfgp_
        automated match to d3nffa_
        protein/RNA complex
      5. 2397920Domain d3nfgi_: 3nfg I: [344941]
        Other proteins in same PDB: d3nfgb1, d3nfgb2, d3nfgd1, d3nfgd2, d3nfgf1, d3nfgf2, d3nfgh1, d3nfgh2, d3nfgj1, d3nfgj2, d3nfgl1, d3nfgl2, d3nfgn1, d3nfgn2, d3nfgp_
        automated match to d3nffa_
        protein/RNA complex
      6. 2397921Domain d3nfgk_: 3nfg K: [344944]
        Other proteins in same PDB: d3nfgb1, d3nfgb2, d3nfgd1, d3nfgd2, d3nfgf1, d3nfgf2, d3nfgh1, d3nfgh2, d3nfgj1, d3nfgj2, d3nfgl1, d3nfgl2, d3nfgn1, d3nfgn2, d3nfgp_
        automated match to d3nffa_
        protein/RNA complex
      7. 2397922Domain d3nfgm_: 3nfg M: [344947]
        Other proteins in same PDB: d3nfgb1, d3nfgb2, d3nfgd1, d3nfgd2, d3nfgf1, d3nfgf2, d3nfgh1, d3nfgh2, d3nfgj1, d3nfgj2, d3nfgl1, d3nfgl2, d3nfgn1, d3nfgn2, d3nfgp_
        automated match to d3nffa_
        protein/RNA complex
      8. 2397923Domain d3nfgo_: 3nfg O: [344950]
        Other proteins in same PDB: d3nfgb1, d3nfgb2, d3nfgd1, d3nfgd2, d3nfgf1, d3nfgf2, d3nfgh1, d3nfgh2, d3nfgj1, d3nfgj2, d3nfgl1, d3nfgl2, d3nfgn1, d3nfgn2, d3nfgp_
        automated match to d3nffa_
        protein/RNA complex

More info for Protein RNA polymerase I subunit A49, interaction domain from b.65.1.2: RNA polymerase I A49/34.5, interaction domains

Timeline for Protein RNA polymerase I subunit A49, interaction domain from b.65.1.2: RNA polymerase I A49/34.5, interaction domains:

  • Protein RNA polymerase I subunit A49, interaction domain from b.65.1.2: RNA polymerase I A49/34.5, interaction domains is new in SCOPe 2.07-stable