Lineage for Protein: Proteasome regulatory subunit Rpn6, N-terminal domain

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2338494Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2339718Superfamily a.118.8: TPR-like [48452] (10 families) (S)
  5. 2340010Family a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains [345951] (10 proteins)
    N-terminal part of Pfam PF06272
    Described in PubMed 15180986 as 'HAM (HEAT analagous motif) domain'
    Probably homologous to TPR rather than HEAT, based on PubMed 15790418

    this is a repeat family; one repeat unit is 4cr2 O:123-163 found in domain
  6. 2340032Protein Proteasome regulatory subunit Rpn6, N-terminal domain [346036] (2 species)

Species:

  1. 2340033Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346198] (1 PDB entry)
  2. 2340035Fruit fly (Drosophila melanogaster) [TaxId:7227] [346199] (2 PDB entries)
    1. Domain for 3txm:
    2. Domain for 3txn:

More info for Protein Proteasome regulatory subunit Rpn6, N-terminal domain from a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains

Timeline for Protein Proteasome regulatory subunit Rpn6, N-terminal domain from a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains:

  • Protein Proteasome regulatory subunit Rpn6, N-terminal domain from a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains is new in SCOPe 2.07-stable
  • Protein Proteasome regulatory subunit Rpn6, N-terminal domain from a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains appears in the current release, SCOPe 2.08