Lineage for Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2397876Fold b.65: triple barrel [50915] (1 superfamily)
    dimer of two non-identical subunits; forms two similar barrels, n=8, S=10 each, that are fused together with the formation of third barrel, n=6, S=8
  4. 2397877Superfamily b.65.1: Rap30/74 interaction domain-like [50916] (3 families) (S)
  5. 2397891Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains [345965] (3 proteins)
    Homology with TFIIF discussed in PubMed 20797630

Proteins:

  1. 2397892RNA polymerase I subunit A34.5, interaction domain [346057] (2 species)
    N-terminal part of Pfam PF08208
    Extended C-terminal part of this domain disordered in some structures
    1. 2397893Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346250] (2 PDB entries)
    2. 2397897Species Candida glabrata [TaxId:5478] [346251] (2 PDB entries)
  2. 2397910RNA polymerase I subunit A49, interaction domain [346058] (2 species)
    N-terminal part of Pfam PF06870
    1. 2397911Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346252] (2 PDB entries)
    2. 2397915Species Candida glabrata [TaxId:5478] [346253] (2 PDB entries)
  3. 2397928automated matches [346059] (1 species)
    not a true protein

More info for Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains

Timeline for Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains:

  • Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains is new in SCOPe 2.07-stable