SCOPe 2.08: Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains

Lineage for Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.65: triple barrel [50915] (1 superfamily)
   dimer of two non-identical subunits; forms two similar barrels, n=8, S=10 each, that are fused together with the formation of third barrel, n=6, S=8

4. Superfamily b.65.1: Rap30/74 interaction domain-like [50916] (3 families)

5. Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains [345965] (3 proteins)
   Homology with TFIIF discussed in PubMed 20797630

Proteins:

1. RNA polymerase I subunit A34.5, interaction domain [346057] (2 species)
   N-terminal part of Pfam PF08208
   Extended C-terminal part of this domain disordered in some structures

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346250] (2 PDB entries)

   2. Species Candida glabrata [TaxId:5478] [346251] (2 PDB entries)

2. RNA polymerase I subunit A49, interaction domain [346058] (2 species)
   N-terminal part of Pfam PF06870

   1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346252] (2 PDB entries)

   2. Species Candida glabrata [TaxId:5478] [346253] (2 PDB entries)

3. automated matches [346059] (1 species)
   not a true protein

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346254] (1 PDB entry)

More info for Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains

Timeline for Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains:

• Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains first appeared in SCOPe 2.07