SCOPe 2.08: Domain d5o9zp_: 5o9z P:

Lineage for d5o9zp_ (5o9z P:)

1. Root: SCOPe 2.08

2. Class j: Peptides [58231] (151 folds)

3. Fold j.143: Pre-mRNA splicing factor Snu66-like [345907] (1 superfamily)
   Extended helical fragments

4. Superfamily j.143.1: Pre-mRNA splicing factor Snu66-like [345943] (1 family)
   Pfam PF03343

5. Family j.143.1.1: Pre-mRNA splicing factor Sart1 / Snu66-like [346001] (1 protein)

6. Protein Pre-mRNA splicing factor Sart1 / Snu66 [346144] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [346462] (1 PDB entry)

8. Domain d5o9zp_: 5o9z P: [345818]
   Other proteins in same PDB: d5o9ze1, d5o9ze2, d5o9zg_, d5o9zh1, d5o9zh2, d5o9zi_, d5o9zk_, d5o9zv_, d5o9zx_, d5o9zy_
   protein/RNA complex

Details for d5o9zp_

PDB Entry: 5o9z

PDB Description: cryo-em structure of a pre-catalytic human spliceosome primed for activation (b complex)

PDB Compounds: (P:) U4/U6.U5 tri-snRNP-associated protein 1

SCOPe Domain Sequences for d5o9zp_:

Sequence, based on SEQRES records:

>d5o9zp_ j.143.1.1 (P:) Pre-mRNA splicing factor Sart1 / Snu66 {Human (Homo sapiens) [TaxId: 9606]}
keagtkeepvtadvinpmalrqreelreklaaakekrllnqklgkiktlgeddpwlddta
awiersrqlqkekdlaekraklleemdqefgvstlveeefgqrrqdlysardlqgltveh
aidsfregetmiltlkdkgvlqeeedvlvnvnlvdkeraeknvelr

Sequence, based on observed residues (ATOM records):

>d5o9zp_ j.143.1.1 (P:) Pre-mRNA splicing factor Sart1 / Snu66 {Human (Homo sapiens) [TaxId: 9606]}
keagtkeepvtadvinpmalrqreelreklaaakekrllnqklgkiktlgeddpwlddta
awiersrqlqkekvnvnlvdkeraeknvelr

Timeline for d5o9zp_:

• d5o9zp_ first appeared in SCOPe 2.07