SCOPe 2.08: Domain d5lqdc1: 5lqd C:2-451

Lineage for d5lqdc1 (5lqd C:2-451)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families)

5. Family c.87.1.0: automated matches [191559] (1 protein)
   not a true family

6. Protein automated matches [190965] (40 species)
   not a true protein

7. Species Streptomyces venezuelae [TaxId:953739] [346333] (1 PDB entry)

8. Domain d5lqdc1: 5lqd C:2-451 [345783]
   Other proteins in same PDB: d5lqda2, d5lqdb2, d5lqdc2, d5lqdd2
   automated match to d5hvlb_
   complexed with edo, mes

Details for d5lqdc1

PDB Entry: 5lqd, 1.95 Å

PDB Description: trehalose-6-phosphate synthase, gdp-glucose-dependent otsa

PDB Compounds: (C:) alpha,alpha-trehalose-phosphate synthase

SCOPe Domain Sequences for d5lqdc1:

Sequence, based on SEQRES records:

>d5lqdc1 c.87.1.0 (C:2-451) automated matches {Streptomyces venezuelae [TaxId: 953739]}
asvlvasnrgpvsyvrgedgeldarrgggglvsglsavssqdslwvcaalgegdreavrr
gigepgvrmldiapdvyadayngiansvlwflhhhlydiprepvfdaafrhrweayrayn
rafaealaaaadegaavlvqdyhlalvpgqlrelrpdlrighfthtpwaspeyfrmlpad
igdellrgmlgadelgfhtsawasaflscaggeqprtrvrvhplgvdaeelralahrpqv
derlarlreevgdrktivrvdrtelsknilrgllayrelltvhpewrdrvvhlasaypsr
qdlaayraytasvtelaaeinaefgtadwqpvlvsveddftrslaayrladvalvnpvrd
gmnlvakeipvvsdagcalvlstgagayeelkedaltvhpydvsetaealhtaltmpppe
radrtkrlasaatalppqrwflnqleglsd

Sequence, based on observed residues (ATOM records):

>d5lqdc1 c.87.1.0 (C:2-451) automated matches {Streptomyces venezuelae [TaxId: 953739]}
asvlvasnrgpvsyvrldarrgggglvsglsavssqdslwvcaalgegdreavrrgigep
gvrmldiapdvyadayngiansvlwflhhhlydiprepvfdaafrhrweayraynrafae
alaaaadegaavlvqdyhlalvpgqlrelrpdlrighfthtpwaspeyfrmlpadigdel
lrgmlgadelgfhtsawasaflscaggeqprtrvrvhplgvdaeelralahrpqvderla
rlreevgdrktivrvdrtelsknilrgllayrelltvhpewrdrvvhlasaypsrqdlaa
yraytasvtelaaeinaefgtadwqpvlvsveddftrslaayrladvalvnpvrdgmnlv
akeipvvsdagcalvlstgagayeelkedaltvhpydvsetaealhtaltmppperadrt
krlasaatalppqrwflnqleglsd

Timeline for d5lqdc1:

• d5lqdc1 first appeared in SCOPe 2.07