Lineage for d5k3hg2 (5k3h G:299-483)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316812Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 2317865Superfamily a.29.3: Acyl-CoA dehydrogenase C-terminal domain-like [47203] (3 families) (S)
    multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel
  5. 2317999Family a.29.3.0: automated matches [227204] (1 protein)
    not a true family
  6. 2318000Protein automated matches [226935] (28 species)
    not a true protein
  7. 2318142Species Nematode (Caenorhabditis elegans) [TaxId:6239] [321815] (4 PDB entries)
  8. 2318155Domain d5k3hg2: 5k3h G:299-483 [345745]
    Other proteins in same PDB: d5k3ha1, d5k3hb1, d5k3hc1, d5k3hd1, d5k3he1, d5k3hf1, d5k3hg1, d5k3hh1
    automated match to d5k3ic2

Details for d5k3hg2

PDB Entry: 5k3h (more details), 2.48 Å

PDB Description: crystals structure of acyl-coa oxidase-1 in caenorhabditis elegans, apo form-ii
PDB Compounds: (G:) Acyl-coenzyme A oxidase

SCOPe Domain Sequences for d5k3hg2:

Sequence, based on SEQRES records: (download)

>d5k3hg2 a.29.3.0 (G:299-483) automated matches {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
ltgqaimlsyalniatrysavrrqgqidknepevkvleyqtqqhrlfpfiarayafqfag
aetvklyervlkemksgnvslmadlhaltsglksvvthqtgegieqarmacgghgysmas
yiseiygvaiggctyegenmvmllqlarylvksaalvksgkasqlgplvaylgarsepts
lidrv

Sequence, based on observed residues (ATOM records): (download)

>d5k3hg2 a.29.3.0 (G:299-483) automated matches {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
ltgqaimlsyalniatrysavrrqgqidknepevkvleyqtqqhrlfpfiarayafqfag
aetvklyervladlhaltsglksvvthqtgegieqarmacgghgysmasyiseiygvaig
enmvmllqlarylvksaalvksgkasqlgplvaylgarseptslidrv

SCOPe Domain Coordinates for d5k3hg2:

Click to download the PDB-style file with coordinates for d5k3hg2.
(The format of our PDB-style files is described here.)

Timeline for d5k3hg2:

  • d5k3hg2 is new in SCOPe 2.07-stable