Lineage for d5k1ma_ (5k1m A:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2414849Superfamily c.1.4: FMN-linked oxidoreductases [51395] (2 families) (S)
  5. 2415386Family c.1.4.0: automated matches [191310] (1 protein)
    not a true family
  6. 2415387Protein automated matches [190048] (22 species)
    not a true protein
  7. 2415520Species Shewanella oneidensis [TaxId:211586] [187764] (13 PDB entries)
  8. 2415527Domain d5k1ma_: 5k1m A: [345723]
    automated match to d5k1ka_
    complexed with 4ks, fmn

Details for d5k1ma_

PDB Entry: 5k1m (more details), 1.5 Å

PDB Description: crystal structure of oxidized shewanella yellow enzyme 4 (sye4) in complex with p-methoxyphenol
PDB Compounds: (A:) NAD(P)H:flavin oxidoreductase Sye4

SCOPe Domain Sequences for d5k1ma_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5k1ma_ c.1.4.0 (A:) automated matches {Shewanella oneidensis [TaxId: 211586]}
nsvenlfdtyklndtitlknrilmapltrcmadanlvptddmvayyarraeagliiseat
iirpdaqgypntpgiftqaqiagwrkvtdavhanggkifvqlwhtgrvahphffgggdvl
apsaqkiegsvprmreltyvtpkavtvediqglvrdyakaaenvieagfdgveihgangy
lidqflhhdsnrrtdeyggtpvnmsrfalevvdaiiarighdrtglrispgayfnmasds
rdrvvfdyllpelekrdlafvhigifddsiefdylggtassyvrahygktlvgvgsysae
taskaiaedkfdliaigrpfianpdyvakvrnseelvaysdemlasli

SCOPe Domain Coordinates for d5k1ma_:

Click to download the PDB-style file with coordinates for d5k1ma_.
(The format of our PDB-style files is described here.)

Timeline for d5k1ma_:

  • d5k1ma_ is new in SCOPe 2.07-stable