Lineage for d5k16b_ (5k16 B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2497139Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2497140Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2498051Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 2498052Protein automated matches [190230] (21 species)
    not a true protein
  7. 2498073Species Human (Homo sapiens) [TaxId:9606] [187072] (48 PDB entries)
  8. 2498148Domain d5k16b_: 5k16 B: [345722]
    automated match to d5l8wa_
    complexed with gol, zn

Details for d5k16b_

PDB Entry: 5k16 (more details), 2.6 Å

PDB Description: crystal structure of free ubiquitin-specific protease 12
PDB Compounds: (B:) Ubiquitin carboxyl-terminal hydrolase 12

SCOPe Domain Sequences for d5k16b_:

Sequence, based on SEQRES records: (download)

>d5k16b_ d.3.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nasalekeigpeqfpvnehyfglvnfgntcycnsvlqalyfcrpfrekvlayksqprkke
slltcladlfhsiatqkkkvgvippkkfitrlrkenelfdnymqqdaheflnyllntiad
ilqeerkqekqngrlpngnidnennnstpdptwvheifqgtltnetrcltcetisskded
fldlsvdveqntsithclrgfsntetlcseykyyceecrskqeahkrmkvkklpmilalh
lkrfkymdqlhrytklsyrvvfplelrlfntsgdatnpdrmydlvavvvhcgsgpnrghy
iaivkshdfwllfdddivekidaqaieefygltsdisknsesgyilfyqsrd

Sequence, based on observed residues (ATOM records): (download)

>d5k16b_ d.3.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
nasalekeigpeqfpvnehyfglvnfgntcycnsvlqalyfcrpfrekvlayksqprkke
slltcladlfhsiatqkkkvgvippkkfitrlrkenelfdnymqqdaheflnyllntiad
ilqeerkqekqptwvheifqgtltnetrcltcetisskdedfldlsvdveqntsithclr
gfsntetlcseykyyceecrskqeahkrmkvkklpmilalhlkrfkymdqlhrytklsyr
vvfplelrlfntsgdatnpdrmydlvavvvhcgsgpnrghyiaivkshdfwllfdddive
kidaqaieefyglknsesgyilfyqsrd

SCOPe Domain Coordinates for d5k16b_:

Click to download the PDB-style file with coordinates for d5k16b_.
(The format of our PDB-style files is described here.)

Timeline for d5k16b_:

  • d5k16b_ is new in SCOPe 2.07-stable