SCOPe 2.08: Domain d5jpta2: 5jpt A:271-454

Lineage for d5jpta2 (5jpt A:271-454)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.19: Tandem AAA-ATPase domain [81268] (41 proteins)
   duplication: tandem repeat of two RecA-like (AAA) domains

6. Protein Pre-mRNA splicing factor DEAH RNA helicase Prp43, C-terminal domain [419075] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [419569] (2 PDB entries)

8. Domain d5jpta2: 5jpt A:271-454 [345696]
   Other proteins in same PDB: d5jpta1, d5jpta3, d5jpta4, d5jpta5, d5jptb1, d5jptb3, d5jptb4, d5jptb5
   automated match to d3kx2a2
   protein/RNA complex; complexed with act, cdp, gol, mg, ni

Details for d5jpta2

PDB Entry: 5jpt, 2.94 Å

PDB Description: crystal structure of the prp43p deah-box rna helicase in complex with cdp

PDB Compounds: (A:) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

SCOPe Domain Sequences for d5jpta2:

Sequence; same for both SEQRES and ATOM records:

>d5jpta2 c.37.1.19 (A:271-454) Pre-mRNA splicing factor DEAH RNA helicase Prp43, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
typvelyytpefqrdyldsairtvlqihateeagdillfltgedeiedavrkislegdql
vreegcgplsvyplygslpphqqqrifepapeshngrpgrkvvistniaetsltidgivy
vvdpgfskqkvynprirvesllvspiskasaqqragragrtrpgkcfrlyteeafqkeli
eqsy

Timeline for d5jpta2:

• d5jpta2 first appeared in SCOPe 2.07