Lineage for d5ganf2 (5gan F:43-346)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2736086Fold a.183: Nop domain [89123] (1 superfamily)
    multihelical; array of longer and shorter helices; contains an alpha-hairpin dimerisation subdomain
  4. 2736087Superfamily a.183.1: Nop domain [89124] (2 families) (S)
  5. 2736088Family a.183.1.1: Nop domain [89125] (2 proteins)
    putative snoRNA binding domain
  6. 2736092Protein U4/U6 small nuclear ribonucleoprotein Prp31 [158762] (2 species)
    contains insertion of a small 4-helical bundle at the tip of a long alpha-hairpin arm; this insertion approximately corresponds to the NOSIC (NUC001) domain; Pfam PF08060
  7. 2736093Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346215] (1 PDB entry)
  8. 2736094Domain d5ganf2: 5gan F:43-346 [345633]
    Other proteins in same PDB: d5gane_, d5ganf1, d5gang1, d5gang2, d5ganj_
    complexed with gtp
    has additional subdomain(s) that are not in the common domain

Details for d5ganf2

PDB Entry: 5gan (more details), 3.6 Å

PDB Description: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at 3.7 angstrom
PDB Compounds: (F:) Pre-mRNA-processing factor 31

SCOPe Domain Sequences for d5ganf2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ganf2 a.183.1.1 (F:43-346) U4/U6 small nuclear ribonucleoprotein Prp31 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d5ganf2:

Click to download the PDB-style file with coordinates for d5ganf2.
(The format of our PDB-style files is described here.)

Timeline for d5ganf2: