SCOPe 2.08: Domain d5avfa1: 5avf A:58-296

Lineage for d5avfa1 (5avf A:58-296)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.110: Profilin-like [55769] (10 superfamilies)
   core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha

4. Superfamily d.110.6: Sensory domain-like [103190] (5 families)
   alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain

5. Family d.110.6.4: Histidine kinase family 1 (HK1) sensor domains [345974] (6 proteins)
   Pfam PF02743, contains double domain arrangement like LuxQ

6. Protein automated matches [346106] (2 species)
   not a true protein

7. Species Vibrio cholerae [TaxId:666] [346381] (2 PDB entries)

8. Domain d5avfa1: 5avf A:58-296 [345537]
   Other proteins in same PDB: d5avfa2, d5avfb2
   automated match to d3c8ca_
   complexed with tau

Details for d5avfa1

PDB Entry: 5avf, 1.95 Å

PDB Description: the ligand binding domain of mlp37 with taurine

PDB Compounds: (A:) Methyl-accepting chemotaxis (MCP) signaling domain protein

SCOPe Domain Sequences for d5avfa1:

Sequence; same for both SEQRES and ATOM records:

>d5avfa1 d.110.6.4 (A:58-296) automated matches {Vibrio cholerae [TaxId: 666]}
vrdeirsmvsdsvdeivdgvskttaevingrksiaqyatsliesnpepdnvrtiisqpli
kntfllvgfglekdgsninndpswnpgptwdprvrpwykdaknagklvitapyadsasge
ilvsvatpvkdsatgqflgsifydvslaelaelvnevklfdagyvfivsedgttiahpkk
efngkpmseflgeskinvdthqviingkpyavsfsdvegedwyvgvvideeiayaalde

Timeline for d5avfa1:

• d5avfa1 first appeared in SCOPe 2.07