Lineage for d4fiqb_ (4fiq B:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2413784Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families) (S)
  5. 2414536Family c.1.2.0: automated matches [191350] (1 protein)
    not a true family
  6. 2414537Protein automated matches [190292] (35 species)
    not a true protein
  7. 2414697Species Pyrococcus horikoshii [TaxId:70601] [346271] (2 PDB entries)
  8. 2414699Domain d4fiqb_: 4fiq B: [345264]
    automated match to d2yzra_

Details for d4fiqb_

PDB Entry: 4fiq (more details), 2.7 Å

PDB Description: Crystal structure of pyridoxal biosynthesis lyase PdxS from Pyrococcus horikoshii
PDB Compounds: (B:) Pyridoxal biosynthesis lyase pdxS

SCOPe Domain Sequences for d4fiqb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4fiqb_ c.1.2.0 (B:) automated matches {Pyrococcus horikoshii [TaxId: 70601]}
dklkiimekgterlkrgfakmvkggvimdvtnaeqariaeeagavavmalhkvpadirka
ggvarmapvekiqeimdavtipvmakcrigheaearilealgvdmidesevltpadpffh
iykkkftapfvcgarnlgeavrriwegaamirtkgeagtgniieavrhvrlvnenirliq
rmtdeeiygvaekfaepylrlafsvkeisglpkrvlenepiyegftyreivediykille
ikklgrlpvvnfaaggvatpadaalmmamgmdgvfvgsgifkssnppkmaraiveavnhw
depdvlaeisreigepmrgqa

SCOPe Domain Coordinates for d4fiqb_:

Click to download the PDB-style file with coordinates for d4fiqb_.
(The format of our PDB-style files is described here.)

Timeline for d4fiqb_:

  • d4fiqb_ is new in SCOPe 2.07-stable