Lineage for d4cr2t1 (4cr2 T:1-178)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2332674Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2333768Superfamily a.118.8: TPR-like [48452] (10 families) (S)
  5. 2334044Family a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains [345951] (10 protein domains)
    N-terminal part of Pfam PF06272
    Described in PubMed 15180986 as 'HAM (HEAT analagous motif) domain'
    Probably homologous to TPR rather than HEAT, based on PubMed 15790418
  6. 2334057Protein Proteasome regulatory subunit Rpn12, N-terminal domain [346033] (1 species)
  7. 2334058Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346195] (1 PDB entry)
  8. 2334059Domain d4cr2t1: 4cr2 T:1-178 [345197]
    Other proteins in same PDB: d4cr21_, d4cr22_, d4cr23_, d4cr24_, d4cr25_, d4cr26_, d4cr27_, d4cr2a_, d4cr2b_, d4cr2c_, d4cr2d_, d4cr2e_, d4cr2f_, d4cr2g_, d4cr2h1, d4cr2h2, d4cr2h3, d4cr2i1, d4cr2i2, d4cr2i3, d4cr2j1, d4cr2j2, d4cr2j3, d4cr2k1, d4cr2k2, d4cr2k3, d4cr2l1, d4cr2l2, d4cr2l3, d4cr2m1, d4cr2m2, d4cr2m3, d4cr2n1, d4cr2n2, d4cr2n3, d4cr2o1, d4cr2o2, d4cr2p1, d4cr2p2, d4cr2q1, d4cr2q2, d4cr2r1, d4cr2r2, d4cr2s1, d4cr2s2, d4cr2t2, d4cr2u1, d4cr2u2, d4cr2v1, d4cr2v2, d4cr2w_, d4cr2x_, d4cr2y_, d4cr2z1, d4cr2z2, d4cr2z3

Details for d4cr2t1

PDB Entry: 4cr2 (more details), 7.7 Å

PDB Description: deep classification of a large cryo-em dataset defines the conformational landscape of the 26s proteasome
PDB Compounds: (T:) 26s proteasome regulatory subunit rpn12

SCOPe Domain Sequences for d4cr2t1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4cr2t1 a.118.8.9 (T:1-178) Proteasome regulatory subunit Rpn12, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mpslaeltkslsiafengdyaacekllppikieliknnllipdlsiqndiylndlmitkr
ilevgalasiqtfnfdsfenyfnqlkpyyfsnnhklsesdkksklislyllnllsqnntt
kfhselqyldkhiknleddsllsypikldrwlmegsyqkawdllqsgsqnisefdsft

SCOPe Domain Coordinates for d4cr2t1:

Click to download the PDB-style file with coordinates for d4cr2t1.
(The format of our PDB-style files is described here.)

Timeline for d4cr2t1:

  • d4cr2t1 is new in SCOPe 2.07-stable

View in 3D
Domains from same chain:
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d4cr2t2
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Domains from other chains:
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d4cr21_, d4cr22_, d4cr23_, d4cr24_, d4cr25_, d4cr26_, d4cr27_, d4cr2a_, d4cr2b_, d4cr2c_, d4cr2d_, d4cr2e_, d4cr2f_, d4cr2g_, d4cr2h1, d4cr2h2, d4cr2h3, d4cr2i1, d4cr2i2, d4cr2i3, d4cr2j1, d4cr2j2, d4cr2j3, d4cr2k1, d4cr2k2, d4cr2k3, d4cr2l1, d4cr2l2, d4cr2l3, d4cr2m1, d4cr2m2, d4cr2m3, d4cr2n1, d4cr2n2, d4cr2n3, d4cr2o1, d4cr2o2, d4cr2p1, d4cr2p2, d4cr2q1, d4cr2q2, d4cr2r1, d4cr2r2, d4cr2s1, d4cr2s2, d4cr2u1, d4cr2u2, d4cr2v1, d4cr2v2, d4cr2w_, d4cr2x_, d4cr2y_, d4cr2z1, d4cr2z2, d4cr2z3