Class a: All alpha proteins [46456] (290 folds) |
Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies) multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix |
Superfamily a.118.8: TPR-like [48452] (11 families) |
Family a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains [345951] (10 proteins) N-terminal part of Pfam PF06272 Described in PubMed 15180986 as 'HAM (HEAT analagous motif) domain' Probably homologous to TPR rather than HEAT, based on PubMed 15790418 this is a repeat family; one repeat unit is 4cr2 O:123-163 found in domain |
Protein Proteasome regulatory subunit Rpn5, N-terminal domain [346035] (1 species) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346197] (1 PDB entry) |
Domain d4cr2p1: 4cr2 P:28-325 [345189] Other proteins in same PDB: d4cr21_, d4cr22_, d4cr23_, d4cr24_, d4cr25_, d4cr26_, d4cr27_, d4cr2a_, d4cr2b_, d4cr2c_, d4cr2d1, d4cr2d2, d4cr2e_, d4cr2f_, d4cr2g_, d4cr2h1, d4cr2h2, d4cr2h3, d4cr2i1, d4cr2i2, d4cr2i3, d4cr2j1, d4cr2j2, d4cr2j3, d4cr2k1, d4cr2k2, d4cr2k3, d4cr2l1, d4cr2l2, d4cr2l3, d4cr2m1, d4cr2m2, d4cr2m3, d4cr2n1, d4cr2n2, d4cr2n3, d4cr2o1, d4cr2o2, d4cr2p2, d4cr2q1, d4cr2q2, d4cr2r1, d4cr2r2, d4cr2s1, d4cr2s2, d4cr2t1, d4cr2t2, d4cr2u1, d4cr2u2, d4cr2v1, d4cr2v2, d4cr2w_, d4cr2x_, d4cr2y_, d4cr2z1, d4cr2z2, d4cr2z3 |
PDB Entry: 4cr2 (more details), 7.7 Å
SCOPe Domain Sequences for d4cr2p1:
Sequence; same for both SEQRES and ATOM records: (download)
>d4cr2p1 a.118.8.9 (P:28-325) Proteasome regulatory subunit Rpn5, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} aqndcnsaldqllvlekktrqasdlasskevlakivdllasrnkwddlneqltllskkhg qlklsiqymiqkvmeylkssksldlntrisvietirvvtenkifveverarvtkdlveik keegkideaadilcelqvetygsmemsekiqfileqmelsilkgdysqatvlsrkilkkt fknpkyeslkleyynllvkislhkreylevaqylqeiyqtdaiksdeakwkpvlshivyf lvlspygnlqndlihkiqndnnlkklesqeslvklfttnelmrwpivqktyepvlned
Timeline for d4cr2p1:
View in 3D Domains from other chains: (mouse over for more information) d4cr21_, d4cr22_, d4cr23_, d4cr24_, d4cr25_, d4cr26_, d4cr27_, d4cr2a_, d4cr2b_, d4cr2c_, d4cr2d1, d4cr2d2, d4cr2e_, d4cr2f_, d4cr2g_, d4cr2h1, d4cr2h2, d4cr2h3, d4cr2i1, d4cr2i2, d4cr2i3, d4cr2j1, d4cr2j2, d4cr2j3, d4cr2k1, d4cr2k2, d4cr2k3, d4cr2l1, d4cr2l2, d4cr2l3, d4cr2m1, d4cr2m2, d4cr2m3, d4cr2n1, d4cr2n2, d4cr2n3, d4cr2o1, d4cr2o2, d4cr2q1, d4cr2q2, d4cr2r1, d4cr2r2, d4cr2s1, d4cr2s2, d4cr2t1, d4cr2t2, d4cr2u1, d4cr2u2, d4cr2v1, d4cr2v2, d4cr2w_, d4cr2x_, d4cr2y_, d4cr2z1, d4cr2z2, d4cr2z3 |