Lineage for d4c3hn_ (4c3h N:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2397876Fold b.65: triple barrel [50915] (1 superfamily)
    dimer of two non-identical subunits; forms two similar barrels, n=8, S=10 each, that are fused together with the formation of third barrel, n=6, S=8
  4. 2397877Superfamily b.65.1: Rap30/74 interaction domain-like [50916] (3 families) (S)
  5. 2397891Family b.65.1.2: RNA polymerase I A49/34.5, interaction domains [345965] (3 proteins)
    Homology with TFIIF discussed in PubMed 20797630
  6. 2397892Protein RNA polymerase I subunit A34.5, interaction domain [346057] (2 species)
    N-terminal part of Pfam PF08208
    Extended C-terminal part of this domain disordered in some structures
  7. 2397893Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346250] (2 PDB entries)
  8. 2397896Domain d4c3hn_: 4c3h N: [345103]
    Other proteins in same PDB: d4c3ha_, d4c3hb_, d4c3hc1, d4c3hc2, d4c3hd_, d4c3he1, d4c3he2, d4c3hf_, d4c3hg1, d4c3hg2, d4c3hh_, d4c3hi1, d4c3hi2, d4c3hj_, d4c3hk_, d4c3hl_, d4c3hm_
    complexed with zn

Details for d4c3hn_

PDB Entry: 4c3h (more details), 3.27 Å

PDB Description: Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93
PDB Compounds: (N:) DNA-directed RNA polymerase I subunit RPA34

SCOPe Domain Sequences for d4c3hn_:

Sequence, based on SEQRES records: (download)

>d4c3hn_ b.65.1.2 (N:) RNA polymerase I subunit A34.5, interaction domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
fsipdgfkkckhlknfplngdnkkkakqqqvwlikfpsnvdisklkslpvdfessttmti
dkhdykimddtdiessltqdnlsnmtllvpseskeslkiastakdnaplqfdkvfsvset
akipaidyskvrvprkdvpkveglklehfatgydaedf

Sequence, based on observed residues (ATOM records): (download)

>d4c3hn_ b.65.1.2 (N:) RNA polymerase I subunit A34.5, interaction domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
fsipdgfkkckhlknfplngdnkqqqvwlikfpsnvdisklkslpvdfessttmtidkhd
ykimddtdnmtllvpseskeslkiastaplqfdkvfsvsetakipaidyskvrvprkdvp
kveglklehfatgydaedf

SCOPe Domain Coordinates for d4c3hn_:

Click to download the PDB-style file with coordinates for d4c3hn_.
(The format of our PDB-style files is described here.)

Timeline for d4c3hn_:

  • d4c3hn_ is new in SCOPe 2.07-stable