SCOPe 2.05: Domain d1qj3b_: 1qj3 B:

Lineage for d1qj3b_ (1qj3 B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
   formerly omega-Aminoacid:pyruvate aminotransferase-like

6. Protein Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA [53438] (2 species)
   synonym: 7,8-diaminopelargonic acid synthase

7. Species Escherichia coli [TaxId:562] [53439] (11 PDB entries)

8. Domain d1qj3b_: 1qj3 B: [34498]
   complexed with kap, na, plp

Details for d1qj3b_

PDB Entry: 1qj3, 2.7 Å

PDB Description: crystal structure of 7,8-diaminopelargonic acid synthase in complex with 7-keto-8-aminopelargonic acid

PDB Compounds: (B:) 7,8-diaminopelargonic acid synthase

SCOPe Domain Sequences for d1qj3b_:

Sequence, based on SEQRES records:

>d1qj3b_ c.67.1.4 (B:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}
mttddlafdqrhilhpytsmtsplpvypvvsaegcelilsdgrrlvdgmsswwaaihgyn
hpqlnaamksqidamshvmfggithapaielcrklvamtpqplecvfladsgsvavevam
kmalqywqakgearqrfltfrngyhgdtfgamsvcdpdnsmhslwkgylpenlfapapqs
rmdgewderdmvgfarlmaahrheiaaviiepivqgaggmrmyhpewlkrirkicdregi
lliadeiatgfgrtgklfacehaeiapdilclgkaltggtmtlsatlttrevaetisnge
agcfmhgptfmgnplacaaanaslailesgdwqqqvadievqlreqlapardaemvadvr
vlgaigvvetthpvnmaalqkffveqgvwirpfgkliylmppyiilpqqlqrltaavnra
vqdetffc

Sequence, based on observed residues (ATOM records):

>d1qj3b_ c.67.1.4 (B:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}
mttddlafdqrhilhpytsmtsplpvypvvsaegcelilsdgrrlvdgmsswwaaihgyn
hpqlnaamksqidamshvmfggithapaielcrklvamtpqplecvfladsgsvavevam
kmalqywqakgearqrfltfrngyhgdtfgamsvcdpdnlpenlfapapqsrmewderdm
vgfarlmaahrheiaaviiepivqgaggmrmyhpewlkrirkicdregilliadeiatgf
grtgklfacehaeiapdilclgkaltggtmtlsatlttrevaetisnggcfmhgptfmgn
placaaanaslailesgdwqqqvadievqlreqlapardaemvadvrvlgaigvvetthp
vnmaalqkffveqgvwirpfgkliylmppyiilpqqlqrltaavnravqdetffc

Timeline for d1qj3b_:

• d1qj3b_ first appeared (with stable ids) in SCOP 1.55
  
• d1qj3b_ appears in SCOPe 2.04
  
• d1qj3b_ appears in SCOPe 2.06
  
• d1qj3b_ appears in the current release, SCOPe 2.08