Lineage for d3jb9a4 (3jb9 A:698-822)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316812Fold a.29: Bromodomain-like [47363] (15 superfamilies)
    4 helices; bundle; minor mirror variant of up-and-down topology
  4. 2316813Superfamily a.29.2: Bromodomain [47370] (2 families) (S)
  5. 2316814Family a.29.2.1: Bromodomain [47371] (6 protein domains)
  6. 2316884Protein Pre-mRNA splicing factor 8, Prp8 / Spp42 [346022] (1 species)
  7. 2316885Species Schizosaccharomyces pombe 972h- [TaxId:284812] [346175] (1 PDB entry)
  8. 2316886Domain d3jb9a4: 3jb9 A:698-822 [344795]
    Other proteins in same PDB: d3jb9a1, d3jb9a2, d3jb9a3, d3jb9a5, d3jb9b1, d3jb9b2, d3jb9b3, d3jb9b4, d3jb9b5, d3jb9c_, d3jb9e_, d3jb9f_, d3jb9g_, d3jb9h_, d3jb9i_, d3jb9j_, d3jb9k_, d3jb9l_, d3jb9m_, d3jb9r_, d3jb9s1, d3jb9s2, d3jb9t1, d3jb9t2, d3jb9u1, d3jb9u2, d3jb9u3, d3jb9v1, d3jb9v2, d3jb9w_, d3jb9x1, d3jb9x2, d3jb9x3, d3jb9x4, d3jb9y1, d3jb9y2, d3jb9z_
    protein/RNA complex; complexed with adp, gdp, mg, zn

Details for d3jb9a4

PDB Entry: 3jb9 (more details), 3.6 Å

PDB Description: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
PDB Compounds: (A:) Pre-mRNA-splicing factor spp42

SCOPe Domain Sequences for d3jb9a4:

Sequence; same for both SEQRES and ATOM records: (download)

>d3jb9a4 a.29.2.1 (A:698-822) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Schizosaccharomyces pombe 972h- [TaxId: 284812]}

SCOPe Domain Coordinates for d3jb9a4:

Click to download the PDB-style file with coordinates for d3jb9a4.
(The format of our PDB-style files is described here.)

Timeline for d3jb9a4:

  • d3jb9a4 is new in SCOPe 2.07-stable