Lineage for d6aqya1 (6aqy A:2-333)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2426096Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2426097Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2430344Family c.2.1.0: automated matches [191313] (1 protein)
    not a true family
  6. 2430345Protein automated matches [190069] (243 species)
    not a true protein
  7. 2431808Species Naegleria fowleri [TaxId:5763] [338422] (2 PDB entries)
  8. 2431815Domain d6aqya1: 6aqy A:2-333 [344478]
    Other proteins in same PDB: d6aqya2, d6aqye2
    automated match to d6aqzb_
    complexed with cl, so4

Details for d6aqya1

PDB Entry: 6aqy (more details), 2.55 Å

PDB Description: crystal structure of a gdp-l-fucose synthetase from naegleria fowleri
PDB Compounds: (A:) gdp-l-fucose synthetase

SCOPe Domain Sequences for d6aqya1:

Sequence, based on SEQRES records: (download)

>d6aqya1 c.2.1.0 (A:2-333) automated matches {Naegleria fowleri [TaxId: 5763]}
aqrevsdqpitltqddvilvtggtglfgkavehivkkeqikgkwvflgskdgdlrdadac
kqpfekyrptyvihlaafvgglfknmnfkvsfwldnvnmnnniltccydfgvkktiscls
tcvfpdkieypiteeklhegpphfsnnayayakrmldmlgrwynekavnegksclftsvi
ptnlfgphdnfnveaghvlpglmhkcykaqqngtdfvvfgsgkplrqflyshdaarmllw
tmfnyqseepimlcvseedeksigqvaqtikdafnftgnmvfdtskadgqykktssnakf
lrlnptfqytpfeqaiketvqwflenyetark

Sequence, based on observed residues (ATOM records): (download)

>d6aqya1 c.2.1.0 (A:2-333) automated matches {Naegleria fowleri [TaxId: 5763]}
aqrevsdqpitltqddvilvtggtglfgkavehivkkeqikgkwvflgskdgdlrdadac
kqpfekyrptyvihlaafvmnfkvsfwldnvnmnnniltccydfgvkktisclstcvfpd
kieypiteeklhegpphfsnnayayakrmldmlgrwynekavnegksclftsviptnlfg
phdnfnveaghvlpglmhkcykaqqngtdfvvfgsgkplrqflyshdaarmllwtmfnyq
seepimlcvseedeksigqvaqtikdafnftgnmvfdtskadgqykktssnakflrlnpt
fqytpfeqaiketvqwflenyetark

SCOPe Domain Coordinates for d6aqya1:

Click to download the PDB-style file with coordinates for d6aqya1.
(The format of our PDB-style files is described here.)

Timeline for d6aqya1:

  • d6aqya1 is new in SCOPe 2.07-stable