SCOPe 2.08: Domain d6aqya1: 6aqy A:2-333

Lineage for d6aqya1 (6aqy A:2-333)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (319 species)
   not a true protein

7. Species Naegleria fowleri [TaxId:5763] [338422] (2 PDB entries)

8. Domain d6aqya1: 6aqy A:2-333 [344478]
   Other proteins in same PDB: d6aqya2, d6aqye2
   automated match to d6aqzb_
   complexed with cl, so4

Details for d6aqya1

PDB Entry: 6aqy, 2.55 Å

PDB Description: crystal structure of a gdp-l-fucose synthetase from naegleria fowleri

PDB Compounds: (A:) gdp-l-fucose synthetase

SCOPe Domain Sequences for d6aqya1:

Sequence, based on SEQRES records:

>d6aqya1 c.2.1.0 (A:2-333) automated matches {Naegleria fowleri [TaxId: 5763]}
aqrevsdqpitltqddvilvtggtglfgkavehivkkeqikgkwvflgskdgdlrdadac
kqpfekyrptyvihlaafvgglfknmnfkvsfwldnvnmnnniltccydfgvkktiscls
tcvfpdkieypiteeklhegpphfsnnayayakrmldmlgrwynekavnegksclftsvi
ptnlfgphdnfnveaghvlpglmhkcykaqqngtdfvvfgsgkplrqflyshdaarmllw
tmfnyqseepimlcvseedeksigqvaqtikdafnftgnmvfdtskadgqykktssnakf
lrlnptfqytpfeqaiketvqwflenyetark

Sequence, based on observed residues (ATOM records):

>d6aqya1 c.2.1.0 (A:2-333) automated matches {Naegleria fowleri [TaxId: 5763]}
aqrevsdqpitltqddvilvtggtglfgkavehivkkeqikgkwvflgskdgdlrdadac
kqpfekyrptyvihlaafvmnfkvsfwldnvnmnnniltccydfgvkktisclstcvfpd
kieypiteeklhegpphfsnnayayakrmldmlgrwynekavnegksclftsviptnlfg
phdnfnveaghvlpglmhkcykaqqngtdfvvfgsgkplrqflyshdaarmllwtmfnyq
seepimlcvseedeksigqvaqtikdafnftgnmvfdtskadgqykktssnakflrlnpt
fqytpfeqaiketvqwflenyetark

Timeline for d6aqya1:

• d6aqya1 first appeared in SCOPe 2.07