Lineage for d5xnly_ (5xnl Y:)

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2580604Fold f.43: Chlorophyll a-b binding protein [103510] (1 superfamily)
    membrane all-alpha fold; three transmembrane helices
  4. 2580605Superfamily f.43.1: Chlorophyll a-b binding protein [103511] (2 families) (S)
    duplication: contains two structural repeats
  5. 2580606Family f.43.1.1: Chlorophyll a-b binding protein [103512] (2 proteins)
  6. 2580619Protein automated matches [190507] (2 species)
    not a true protein
  7. 2580620Species Pea (Pisum sativum) [TaxId:3888] [187461] (2 PDB entries)
  8. 2580632Domain d5xnly_: 5xnl Y: [344467]
    Other proteins in same PDB: d5xnla_, d5xnlb_, d5xnlc_, d5xnld_, d5xnle_, d5xnlf_, d5xnlh_, d5xnlk_, d5xnlm_, d5xnlo_, d5xnlp_, d5xnls_, d5xnlz_
    automated match to d2bhwa_
    complexed with bcr, bct, chl, cl, cla, dgd, fe2, hem, lhg, lmg, lut, nex, oex, pho, pl9, sqd, xat

Details for d5xnly_

PDB Entry: 5xnl (more details), 2.7 Å

PDB Description: structure of stacked c2s2m2-type psii-lhcii supercomplex from pisum sativum
PDB Compounds: (Y:) Chlorophyll a-b binding protein 8, chloroplastic

SCOPe Domain Sequences for d5xnly_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5xnly_ f.43.1.1 (Y:) automated matches {Pea (Pisum sativum) [TaxId: 3888]}
gspwygpdrvkylgpfsgespsyltgefpgdygwdtaglsadpetfsknrelevihsrwa
mlgalgcvfpellsrngvkfgeavwfkagsqifseggldylgnpslvhaqsilaiwatqv
ilmgavegyriaggplgevvdplypggsfdplgladdpeafaelkvkelkngrlamfsmf
gffvqaivtgkgplenladhlsdpvnnnawsyatnfvpg

SCOPe Domain Coordinates for d5xnly_:

Click to download the PDB-style file with coordinates for d5xnly_.
(The format of our PDB-style files is described here.)

Timeline for d5xnly_:

  • d5xnly_ is new in SCOPe 2.07-stable