SCOPe 2.08: Domain d5oskf3: 5osk F:77-378

Lineage for d5oskf3 (5osk F:77-378)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
   Pfam PF03133; PubMed 22020298

6. Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)

7. Species Chicken (Gallus gallus) [TaxId:9031] [311385] (176 PDB entries)

8. Domain d5oskf3: 5osk F:77-378 [344390]
   Other proteins in same PDB: d5oska1, d5oska2, d5oskb1, d5oskb2, d5oskc1, d5oskc2, d5oskd1, d5oskd2, d5oske_, d5oskf1, d5oskf2
   complexed with a9q, acp, ca, gdp, gol, gtp, imd, mes, mg

Details for d5oskf3

PDB Entry: 5osk, 2.11 Å

PDB Description: tubulin-7j complex

PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d5oskf3:

Sequence, based on SEQRES records:

>d5oskf3 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records):

>d5oskf3 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptderevflaaynrrreggnvwiaksseasehviq
kylekplllepghrkfdirswvlvdhlyniylyregvlrtssepynsadktchltnhciq
kygryeegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqs
fqlfgfdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfplatsifikl

Timeline for d5oskf3:

• d5oskf3 first appeared in SCOPe 2.07