SCOPe 2.08: Domain d5iieb2: 5iie B:109-197

Lineage for d5iieb2 (5iie B:109-197)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.0: automated matches [191470] (1 protein)
   not a true family

6. Protein automated matches [190740] (31 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187920] (1793 PDB entries)

8. Domain d5iieb2: 5iie B:109-197 [344274]
   Other proteins in same PDB: d5iiel2

Details for d5iieb2

PDB Entry: 5iie, 2.8 Å

PDB Description: structure of the unliganded anti-hiv antibody dh501 that binds gp120 v3 glycan and the base of v3

PDB Compounds: (B:) antibody DH501 light chain

SCOPe Domain Sequences for d5iieb2:

Sequence, based on SEQRES records:

>d5iieb2 b.1.1.0 (B:109-197) automated matches {Human (Homo sapiens) [TaxId: 9606]}
pkasptvtlfppsseelqankatlvclisdfypgvvkvawkadgsavnagvetttpskqs
nnkyaassylsltsdqwkshksyscqvth

Sequence, based on observed residues (ATOM records):

>d5iieb2 b.1.1.0 (B:109-197) automated matches {Human (Homo sapiens) [TaxId: 9606]}
pkasptvtlfppsseelqankatlvclisdfypgvvkvawvetttpskqsnnkyaassyl
yscqvth

Timeline for d5iieb2:

• d5iieb2 first appeared in SCOPe 2.07