Lineage for d5ca0f2 (5ca0 F:77-378)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2541368Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2541369Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2541719Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
    Pfam PF03133; PubMed 22020298
  6. 2541720Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)
  7. 2541721Species Chicken (Gallus gallus) [TaxId:9031] [311385] (79 PDB entries)
  8. 2541758Domain d5ca0f2: 5ca0 F:77-378 [344164]
    Other proteins in same PDB: d5ca0a1, d5ca0a2, d5ca0b1, d5ca0b2, d5ca0c1, d5ca0c2, d5ca0d1, d5ca0d2, d5ca0e_, d5ca0f1, d5ca0f3
    automated match to d3tiia2
    complexed with acp, ca, gdp, gol, gtp, lxl, mes, mg

Details for d5ca0f2

PDB Entry: 5ca0 (more details), 2.5 Å

PDB Description: crystal structure of t2r-ttl-lexibulin complex
PDB Compounds: (F:) Uncharacterized protein

SCOPe Domain Sequences for d5ca0f2:

Sequence, based on SEQRES records: (download)

>d5ca0f2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records): (download)

>d5ca0f2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptderevflaaynrrregregnvwialisseasel
ldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniylyregvlrtssepyn
sanfqdktchltnhciqknygryeegnemffeefnqylmdalnttlensillqikhiirs
clmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqklyaelcqgivdv
aissvfplatsifikl

SCOPe Domain Coordinates for d5ca0f2:

Click to download the PDB-style file with coordinates for d5ca0f2.
(The format of our PDB-style files is described here.)

Timeline for d5ca0f2:

  • d5ca0f2 is new in SCOPe 2.07-stable