SCOPe 2.07: Domain d4c3ib_: 4c3i B:

Lineage for d4c3ib_ (4c3i B:)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily)
   Multidomain subunits of complex domain organization

4. Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (3 families)
   The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit

5. Family e.29.1.1: RNA-polymerase beta [64485] (4 proteins)

6. Protein RNA polymerase I subunit A135 [346117] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346414] (3 PDB entries)

8. Domain d4c3ib_: 4c3i B: [343936]
   Other proteins in same PDB: d4c3ia_, d4c3ie1, d4c3ie2, d4c3if_, d4c3ig1, d4c3ih_, d4c3ii1, d4c3ii2, d4c3ij_, d4c3ik_, d4c3il_, d4c3im_, d4c3in_
   automated match to d4c3hb_
   complexed with mg, mpd, so4, zn

Details for d4c3ib_

PDB Entry: 4c3i, 3 Å

PDB Description: structure of 14-subunit rna polymerase i at 3.0 a resolution, crystal form c2-100

PDB Compounds: (B:) DNA-directed RNA polymerase I subunit rpa135

SCOPe Domain Sequences for d4c3ib_:

Sequence, based on SEQRES records:

>d4c3ib_ e.29.1.1 (B:) RNA polymerase I subunit A135 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigek
vifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrlt
syrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeig
gyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlh
ylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllr
gfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkf
rmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmd
inrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaeki
nfyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcri
stqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlryw
kvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvy
mniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgv
alchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiink
sadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigty
veegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtp
qigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagka
galhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvv
yyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdr
llnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklltksedgeki
fiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk

Sequence, based on observed residues (ATOM records):

>d4c3ib_ e.29.1.1 (B:) RNA polymerase I subunit A135 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
rtadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkdigek
vifdgkplnseeisnsgylgnklsvsveqvsiakpmsndsaverkvypsesrqrltsyrg
klllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeiggyfi
vngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhylnd
gqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrgfkk
ryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfrmll
fmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdinrg
mainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekinfyr
fishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcristqq
sdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywkveg
ktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvymnia
vtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgvalch
rsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinksade
rgfgygtmyktekvdlaldpitqhfgfgndewpkewlekldedglpyigtyveegdpica
yfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpqigdkfssr
hgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkagalhgiaqd
stpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvyyqrlrhmv
ndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrllnssdytq
asvcrecgsilttqqsvprigsistvccrrcsmrfedakkgekifiddsqiwedgqgnkf
vggnetttvaipfvlkyldselsamgirlrynvepk

Timeline for d4c3ib_:

• d4c3ib_ is new in SCOPe 2.07-stable
  
• d4c3ib_ appears in the current release, SCOPe 2.08