Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) |
Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins) members of the family may contain various insert subdomains in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain |
Protein automated matches [190099] (33 species) not a true protein |
Species Bifidobacterium adolescentis [TaxId:1680] [255183] (4 PDB entries) |
Domain d5m9xb1: 5m9x B:1-434 [343100] Other proteins in same PDB: d5m9xb2 automated match to d1r7aa2 complexed with 7kp |
PDB Entry: 5m9x (more details), 2.35 Å
SCOPe Domain Sequences for d5m9xb1:
Sequence; same for both SEQRES and ATOM records: (download)
>d5m9xb1 c.1.8.1 (B:1-434) automated matches {Bifidobacterium adolescentis [TaxId: 1680]} mknkvqlityadrlgdgtiksmtdilrtrfdgvydgvhilpfftpfdgadagfdpidhtk vderlgswddvaelskthnimvdaivnhmsweskqfqdvlakgeeseyypmfltmssvfp ngateedlagiyrprpglpfthykfagktrlvwvsftpqqvdidtdsdkgweylmsifdq maashvsyirlnavgygakeagtscfmtpktfklisrlreegvkrgleilievhsyykkq veiaskvdrvydfalpplllhalstghvepvahwtdirpnnavtvldthdgigvidigsd qldrslkglvpdedvdnlvntihanthgesqaatgaaasnldlyfvnstyysalgcndqh yiaaravqfflpgvpqvyyvgalagkndmellrktnngrdinrhyystaeidenlkrpvv kalnalakfrneld
Timeline for d5m9xb1: