Lineage for Species: White spot syndrome virus (isolate shrimp/china/tongan/1996) [TaxId: 654913]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2406647Fold b.85: beta-clip [51268] (7 superfamilies)
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. 2406808Superfamily b.85.4: dUTPase-like [51283] (2 families) (S)
    forms tight trimer through an additional beta-sheet in each subunit
    subunit beta-sheets are orthogonally packed around the three-fold axis
  5. 2407003Family b.85.4.0: automated matches [191644] (1 protein)
    not a true family
  6. 2407004Protein automated matches [191182] (16 species)
    not a true protein
  7. 2407226Species White spot syndrome virus (isolate shrimp/china/tongan/1996) [TaxId:654913] [342590] (3 PDB entries)

PDB entries in Species: White spot syndrome virus (isolate shrimp/china/tongan/1996) [TaxId: 654913]:

  1. Domain(s) for 5y5o:
    1. 2407236Domain d5y5oa_: 5y5o A: [342621]
      automated match to d3c3ib_
    2. 2407237Domain d5y5ob_: 5y5o B: [342605]
      automated match to d3c3ib_
    3. 2407238Domain d5y5oc_: 5y5o C: [342610]
      automated match to d3c3ib_
    4. 2407239Domain d5y5od_: 5y5o D: [342602]
      automated match to d3c3ib_
    5. 2407240Domain d5y5oe_: 5y5o E: [342591]
      automated match to d3c3ib_
    6. 2407241Domain d5y5of_: 5y5o F: [342596]
      automated match to d3c3ib_
  2. Domain(s) for 5y5p:
    1. 2407230Domain d5y5pa_: 5y5p A: [344469]
      automated match to d5y5pe_
      complexed with dur, mg, pop
    2. 2407231Domain d5y5pb_: 5y5p B: [344470]
      automated match to d5y5pe_
      complexed with dur, mg, pop
    3. 2407232Domain d5y5pc_: 5y5p C: [342614]
      automated match to d3ehwb_
      complexed with dur, mg, pop
    4. 2407233Domain d5y5pd_: 5y5p D: [344471]
      automated match to d5y5pe_
      complexed with dur, mg, pop
    5. 2407234Domain d5y5pe_: 5y5p E: [342636]
      automated match to d3c3ib_
      complexed with dur, mg, pop
    6. 2407235Domain d5y5pf_: 5y5p F: [344472]
      automated match to d5y5pe_
      complexed with dur, mg, pop
  3. Domain(s) for 5y5q:
    1. 2407227Domain d5y5qa_: 5y5q A: [342616]
      automated match to d3c3ib_
      complexed with dut, mg; mutant
    2. 2407228Domain d5y5qb_: 5y5q B: [344473]
      automated match to d5y5pe_
      complexed with dut, mg; mutant
    3. 2407229Domain d5y5qc_: 5y5q C: [344474]
      automated match to d5y5pe_
      complexed with dut, mg; mutant

More info for Species White spot syndrome virus (isolate shrimp/china/tongan/1996) [TaxId:654913] from b.85.4.0 automated matches

Timeline for Species White spot syndrome virus (isolate shrimp/china/tongan/1996) [TaxId:654913] from b.85.4.0 automated matches: