SCOPe 2.08: Domain d6eksa1: 6eks A:51-242

Lineage for d6eksa1 (6eks A:51-242)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families)

5. Family b.29.1.8: Vibrio cholerae sialidase, N-terminal and insertion domains [49965] (1 protein)

6. Protein Vibrio cholerae sialidase, N-terminal and insertion domains [49966] (2 species)
   both domains have this fold
   rest of protein is beta-propeller of six sheets

7. Species Vibrio cholerae [TaxId:243277] [342046] (2 PDB entries)

8. Domain d6eksa1: 6eks A:51-242 [342047]
   Other proteins in same PDB: d6eksa2
   automated match to d1kita1
   complexed with ca, g39, gol

Details for d6eksa1

PDB Entry: 6eks, 1.87 Å

PDB Description: vibrio cholerae neuraminidase complexed with oseltamivir carboxylate

PDB Compounds: (A:) sialidase

SCOPe Domain Sequences for d6eksa1:

Sequence, based on SEQRES records:

>d6eksa1 b.29.1.8 (A:51-242) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 243277]}
alfdynatgdtefdspakqgwmqdntnngsgvltnadgmpawlvqgiggraqwtyslstn
qhaqassfgwrmttemkvlsggmitnyyangtqrvlpiisldssgnlvvefegqtgrtvl
atgtaateyhkfelvflpgsnpsasfyfdgklirdniqptaskqnmivwgngssntdgva
ayrdikfeiqgd

Sequence, based on observed residues (ATOM records):

>d6eksa1 b.29.1.8 (A:51-242) Vibrio cholerae sialidase, N-terminal and insertion domains {Vibrio cholerae [TaxId: 243277]}
alfdynatgdtfdspakqgwmqdntnngsgvltnampawlvqgiggraqwtyslstnqha
qassfgwrmttemkvlsggmitnyyangtqrvlpiisldssgnlvvefegqtgrtvlatg
taateyhkfelvflpgsnpsasfyfdgklirdniqptaskqnmivwgngssntdgvaayr
dikfeiqgd

Timeline for d6eksa1:

• d6eksa1 first appeared in SCOPe 2.06
  
• d6eksa1 appears in SCOPe 2.07