Lineage for d5omxd_ (5omx D:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2311419Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 2311420Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 2311421Family a.22.1.1: Nucleosome core histones [47114] (6 proteins)
    form octamers composed of two copies of each of the four histones
  6. 2311535Protein Histone H2B [47119] (6 species)
  7. 2311536Species African clawed frog (Xenopus laevis) [TaxId:8355] [47121] (42 PDB entries)
  8. 2311577Domain d5omxd_: 5omx D: [341629]
    Other proteins in same PDB: d5omxb_, d5omxc_, d5omxf_, d5omxg_
    automated match to d1s32d_
    complexed with cl, mn

Details for d5omxd_

PDB Entry: 5omx (more details), 2.32 Å

PDB Description: x-ray structure of the h2a-n38c nucleosome core particle
PDB Compounds: (D:) Histone H2B 1.1

SCOPe Domain Sequences for d5omxd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5omxd_ a.22.1.1 (D:) Histone H2B {African clawed frog (Xenopus laevis) [TaxId: 8355]}
trkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstits
reiqtavrlllpgelakhavsegtkavtkytsak

SCOPe Domain Coordinates for d5omxd_:

Click to download the PDB-style file with coordinates for d5omxd_.
(The format of our PDB-style files is described here.)

Timeline for d5omxd_: