Lineage for d5vmfa_ (5vmf A:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2370814Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2370815Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2370862Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)
  6. 2370863Protein Hemagglutinin [49824] (16 species)
    includes rudiment esterase domain
  7. 2370864Species Influenza A virus (a/brevig mission/1/1918(h1n1)) [TaxId:88776] [188803] (5 PDB entries)
  8. 2370872Domain d5vmfa_: 5vmf A: [341422]
    Other proteins in same PDB: d5vmfb_, d5vmfd_, d5vmff_
    automated match to d3ztna_
    complexed with bma, gal, nag, sia; mutant

Details for d5vmfa_

PDB Entry: 5vmf (more details), 2.35 Å

PDB Description: influenza hemagglutinin h1 mutant dh1d in complex with 6'sln
PDB Compounds: (A:) hemagglutinin HA1

SCOPe Domain Sequences for d5vmfa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vmfa_ b.19.1.2 (A:) Hemagglutinin {Influenza A virus (a/brevig mission/1/1918(h1n1)) [TaxId: 88776]}
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvhh
pptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrdlasrmnyywtllepgdtit
featgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvtig
ecpkyvrstklrmatglrnip

SCOPe Domain Coordinates for d5vmfa_:

Click to download the PDB-style file with coordinates for d5vmfa_.
(The format of our PDB-style files is described here.)

Timeline for d5vmfa_: