Lineage for d5o96f2 (5o96 F:76-244)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2492420Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2492421Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2492607Family c.116.1.0: automated matches [191557] (1 protein)
    not a true family
  6. 2492608Protein automated matches [190961] (16 species)
    not a true protein
  7. 2492647Species Legionella pneumophila [TaxId:446] [341250] (2 PDB entries)
  8. 2492657Domain d5o96f2: 5o96 F:76-244 [341262]
    Other proteins in same PDB: d5o96a1, d5o96b1, d5o96c1, d5o96d1, d5o96e1, d5o96f1, d5o96g1, d5o96h1
    automated match to d4e8ba2
    protein/RNA complex; complexed with sam

Details for d5o96f2

PDB Entry: 5o96 (more details), 2.3 Å

PDB Description: structure of the putative methyltransferase lpg2936 from legionella pneumophila in complex with the bound cofactor sam
PDB Compounds: (F:) Ribosomal RNA small subunit methyltransferase E

SCOPe Domain Sequences for d5o96f2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5o96f2 c.116.1.0 (F:76-244) automated matches {Legionella pneumophila [TaxId: 446]}
resplkihlaqaiskgermemvmqksaelgvacitplitercqvkidkekmakkmhqwln
iiigaceqcgrnqipelrqpvyldqfvreakehlklilhpafsktwrdypvqppdvalii
gpeggfsdeeirltsghgflplslgprvlrtetaaitalsvlqaaggdl

SCOPe Domain Coordinates for d5o96f2:

Click to download the PDB-style file with coordinates for d5o96f2.
(The format of our PDB-style files is described here.)

Timeline for d5o96f2: