SCOPe 2.06: Domain d1dkra2: 1dkr A:167-316

Lineage for d1dkra2 (1dkr A:167-316)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.61: PRTase-like [53270] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest

4. Superfamily c.61.1: PRTase-like [53271] (3 families)

5. Family c.61.1.2: Phosphoribosylpyrophosphate synthetase-like [53296] (2 proteins)
   duplication: consists of two domains of this fold

6. Protein Phosphoribosylpyrophosphate synthetase [53297] (2 species)

7. Species Bacillus subtilis [TaxId:1423] [53298] (3 PDB entries)

8. Domain d1dkra2: 1dkr A:167-316 [34115]
   complexed with so4

Details for d1dkra2

PDB Entry: 1dkr, 2.3 Å

PDB Description: crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation.

PDB Compounds: (A:) phosphoribosyl pyrophosphate synthetase

SCOPe Domain Sequences for d1dkra2:

Sequence, based on SEQRES records:

>d1dkra2 c.61.1.2 (A:167-316) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
divivspdhggvtrarkladrlkapiaiidkrrprpnvaevmnivgniegktailiddii
dtagtitlaanalvengakevyaccthpvlsgpaverinnstikelvvtnsiklpeekki
erfkqlsvgpllaeaiirvheqqsvsylfs

Sequence, based on observed residues (ATOM records):

>d1dkra2 c.61.1.2 (A:167-316) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
divivspdhggvtrarkladrlkapiaiidkrmnivgniegktailiddiidtagtitla
analvengakevyaccthpvlsgpaverinnstikelvvtnsiklpeekkierfkqlsvg
pllaeaiirvheqqsvsylfs

Timeline for d1dkra2:

• d1dkra2 first appeared (with stable ids) in SCOP 1.55
  
• d1dkra2 appears in SCOPe 2.05
  
• d1dkra2 appears in SCOPe 2.07
  
• d1dkra2 appears in the current release, SCOPe 2.08