SCOPe 2.08: Domain d5o6td_: 5o6t D:

Lineage for d5o6td_ (5o6t D:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d5o6td_: 5o6t D: [341072]
   automated match to d5ibkc_
   complexed with edo, zn

Details for d5o6td_

PDB Entry: 5o6t, 1.57 Å

PDB Description: birc4 ring in complex with dimeric ubiquitin variant

PDB Compounds: (D:) Polyubiquitin-B

SCOPe Domain Sequences for d5o6td_:

Sequence; same for both SEQRES and ATOM records:

>d5o6td_ d.15.1.1 (D:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
smqilvttisaetirlevepsdtienvkakiqdkegippdqqrlffegkqledgrtlsdy
ninkkstlllvvkf

Timeline for d5o6td_:

• d5o6td_ first appeared in SCOPe 2.06
  
• d5o6td_ appears in SCOPe 2.07